[HTML][HTML] Tat is a multifunctional viral protein that modulates cellular gene expression and functions

E Clark, B Nava, M Caputi - Oncotarget, 2017 - ncbi.nlm.nih.gov
The human immunodeficiency virus type I (HIV-1) has developed several strategies to
condition the host environment to promote viral replication and spread. Viral proteins have …

Current research on viral proteins that interact with fibrillarin

S Decle-Carrasco, AL Rodríguez-Piña… - Molecular Biology …, 2023 - Springer
The nucleolus is a multifunctional nuclear domain primarily dedicated to ribosome
biogenesis. Certain viruses developed strategies to manipulate host nucleolar proteins to …

Large-scale quality analysis of published ChIP-seq data

GK Marinov, A Kundaje, PJ Park… - G3: Genes, Genomes …, 2014 - academic.oup.com
ChIP-seq has become the primary method for identifying in vivo protein–DNA interactions on
a genome-wide scale, with nearly 800 publications involving the technique appearing in …

[HTML][HTML] HIV-1 Tat protein induces DNA damage in human peripheral blood B-lymphocytes via mitochondrial ROS production

R El-Amine, D Germini, VV Zakharova, T Tsfasman… - Redox biology, 2018 - Elsevier
Human immunodeficiency virus (HIV) infection is associated with B-cell malignancies in
patients though HIV-1 is not able to infect B-cells. The rate of B-cell lymphomas in HIV …

The lncRNA PRINS-miRNA-mRNA axis gene expression profile as a circulating biomarker panel in psoriasis

HY Abdallah, NZ Tawfik, NH Soliman… - Molecular Diagnosis & …, 2022 - Springer
Background The interaction between genes and the environment in psoriasis is firmly
coupled by epigenetic modification. Epigenetic modifications are inherited variations in gene …

HIV Tat induces a prolonged MYC relocalization next to IGH in circulating B-cells

D Germini, T Tsfasman, M Klibi, R El-Amine, A Pichugin… - Leukemia, 2017 - nature.com
With combined antiretroviral therapy (cART), the risk for HIV-infected individuals to develop
a non-Hodgkin lymphoma is diminished. However, the incidence of Burkitt lymphoma (BL) …

HIV Tat controls RNA Polymerase II and the epigenetic landscape to transcriptionally reprogram target immune cells

JE Reeder, YT Kwak, RP McNamara, CV Forst, I D'Orso - Elife, 2015 - elifesciences.org
HIV encodes Tat, a small protein that facilitates viral transcription by binding an RNA
structure (trans-activating RNA [TAR]) formed on nascent viral pre-messenger RNAs …

Global pairwise RNA interaction landscapes reveal core features of protein recognition

Q Zhou, N Kunder, JA De la Paz, AE Lasley… - Nature …, 2018 - nature.com
RNA–protein interactions permeate biology. Transcription, translation, and splicing all hinge
on the recognition of structured RNA elements by RNA-binding proteins. Models of RNA …

Nucleolar protein trafficking in response to HIV-1 Tat: rewiring the nucleolus

MA Jarboui, C Bidoia, E Woods, B Roe, K Wynne… - PLoS …, 2012 - journals.plos.org
The trans-activator Tat protein is a viral regulatory protein essential for HIV-1 replication. Tat
trafficks to the nucleoplasm and the nucleolus. The nucleolus, a highly dynamic and …

Suicide gene therapy in cancer and HIV-1 infection: An alternative to conventional treatments

S Saeb, J Van Assche, T Loustau, O Rohr… - Biochemical …, 2022 - Elsevier
Abstract Suicide Gene Therapy (SGT) aims to introduce a gene encoding either a toxin or an
enzyme making the targeted cell more sensitive to chemotherapy. SGT represents an …