[HTML][HTML] Deep learning in drug discovery: an integrative review and future challenges
H Askr, E Elgeldawi, H Aboul Ella… - Artificial Intelligence …, 2023 - Springer
Recently, using artificial intelligence (AI) in drug discovery has received much attention
since it significantly shortens the time and cost of developing new drugs. Deep learning (DL) …
since it significantly shortens the time and cost of developing new drugs. Deep learning (DL) …
[HTML][HTML] Comprehensive survey of recent drug discovery using deep learning
Drug discovery based on artificial intelligence has been in the spotlight recently as it
significantly reduces the time and cost required for developing novel drugs. With the …
significantly reduces the time and cost required for developing novel drugs. With the …
An omics perspective on drug target discovery platforms
J Paananen, V Fortino - Briefings in bioinformatics, 2020 - academic.oup.com
The drug discovery process starts with identification of a disease-modifying target. This
critical step traditionally begins with manual investigation of scientific literature and …
critical step traditionally begins with manual investigation of scientific literature and …
[HTML][HTML] Drug repurposing in oncology: Compounds, pathways, phenotypes and computational approaches for colorectal cancer
P Nowak-Sliwinska, L Scapozza, AR i Altaba - Biochimica et Biophysica …, 2019 - Elsevier
The strategy of using existing drugs originally developed for one disease to treat other
indications has found success across medical fields. Such drug repurposing promises faster …
indications has found success across medical fields. Such drug repurposing promises faster …
Lipid-lowering agents: targets beyond PCSK9
RA Hegele, S Tsimikas - Circulation research, 2019 - Am Heart Assoc
Several new or emerging drugs for dyslipidemia owe their existence, in part, to human
genetic evidence, such as observations in families with rare genetic disorders or in …
genetic evidence, such as observations in families with rare genetic disorders or in …
Connecting chemistry and biology through molecular descriptors
A Fernández-Torras, A Comajuncosa-Creus… - Current Opinion in …, 2022 - Elsevier
Through the representation of small molecule structures as numerical descriptors and the
exploitation of the similarity principle, chemoinformatics has made paramount contributions …
exploitation of the similarity principle, chemoinformatics has made paramount contributions …
Extending the small-molecule similarity principle to all levels of biology with the Chemical Checker
M Duran-Frigola, E Pauls, O Guitart-Pla… - Nature …, 2020 - nature.com
Small molecules are usually compared by their chemical structure, but there is no unified
analytic framework for representing and comparing their biological activity. We present the …
analytic framework for representing and comparing their biological activity. We present the …
DrugAI: a multi-view deep learning model for predicting drug–target activating/inhibiting mechanisms
Understanding the mechanisms of candidate drugs play an important role in drug discovery.
The activating/inhibiting mechanisms between drugs and targets are major types of …
The activating/inhibiting mechanisms between drugs and targets are major types of …
[HTML][HTML] Drug target prediction through deep learning functional representation of gene signatures
Many machine learning applications in bioinformatics currently rely on matching gene
identities when analyzing input gene signatures and fail to take advantage of preexisting …
identities when analyzing input gene signatures and fail to take advantage of preexisting …
De Novo Generation of Chemical Structures of Inhibitor and Activator Candidates for Therapeutic Target Proteins by a Transformer-Based Variational Autoencoder …
Y Matsukiyo, C Yamanaka… - Journal of Chemical …, 2023 - ACS Publications
Deep generative models for molecular generation have been gaining much attention as
structure generators to accelerate drug discovery. However, most previously developed …
structure generators to accelerate drug discovery. However, most previously developed …