Understanding sheath blight resistance in rice: the road behind and the road ahead

KA Molla, S Karmakar, J Molla, P Bajaj… - Plant biotechnology …, 2020 - Wiley Online Library
Rice sheath blight disease, caused by the basidiomycetous necrotroph Rhizoctonia solani,
became one of the major threats to the rice cultivation worldwide, especially after the …

Gene based markers improve precision of genome-wide association studies and accuracy of genomic predictions in rice breeding

C Anilkumar, TP Muhammed Azharudheen, RP Sah… - Heredity, 2023 - nature.com
It is hypothesized that the genome-wide genic markers may increase the prediction accuracy
of genomic selection for quantitative traits. To test this hypothesis, a set of candidate gene …

[HTML][HTML] Genetic dissection of grain size traits through genome-wide association study based on genic markers in rice

AK Nayak, C Anilkumar, S Behera, RP Sah… - Rice Science, 2022 - Elsevier
Grain size plays a significant role in rice, starting from affecting yield to consumer
preference, which is the driving force for deep investigation and improvement of grain size …

[HTML][HTML] Streamlining of Simple Sequence Repeat Data Mining Methodologies and Pipelines for Crop Scanning

S Geethanjali, P Kadirvel, M Anumalla… - Plants, 2024 - mdpi.com
Genetic markers are powerful tools for understanding genetic diversity and the molecular
basis of traits, ushering in a new era of molecular breeding in crops. Over the past 50 years …

Understanding natural genetic variation for grain phytic acid content and functional marker development for phytic acid-related genes in rice

MA Tp, A Kumar, C Anilkumar, RP Sah, S Behera… - BMC Plant …, 2022 - Springer
Background The nutritional value of rice can be improved by developing varieties with
optimum levels of grain phytic acid (PA). Artificial low-PA mutants with impaired PA …

Genome-wide association analysis for plant type characters and yield using cgSSR markers in rice (Oryza sativa L.)

TP Muhammed Azharudheen, AK Nayak, S Behera… - Euphytica, 2022 - Springer
Plant architecture has a substantial impact on photosynthesis, which leads to increased
yield production. Many plant architecture characters are quantitative in inheritance, making …

Comparative transcriptome profiling reveals the basis of differential sheath blight disease response in tolerant and susceptible rice genotypes

P Samal, KA Molla, A Bal, S Ray, H Swain, A Khandual… - Protoplasma, 2022 - Springer
Rice sheath blight (ShB) disease, caused by the fungal pathogen Rhizoctonia solani AG1-
IA, is one of the devastating diseases and causes severe yield losses all over the world. No …

TeaMiD: a comprehensive database of simple sequence repeat markers of tea

H Dubey, HC Rawal, M Rohilla, U Lama, PM Kumar… - Database, 2020 - academic.oup.com
Tea is a highly cross-pollinated, woody, perennial tree. High heterozygosity combined with a
long gestational period makes conventional breeding a cumbersome process. Therefore …

cgSSR marker‐based genome‐wide association study identified genomic regions for panicle characters and yield in rice (Oryza sativa L.)

RP Sah, AK Nayak, A Chandrappa… - Journal of the …, 2023 - Wiley Online Library
BACKGROUND To improve production efficiency, positive alleles corresponding to yield‐
related attributes must be accumulated in a single elite background. We designed and used …

Time-course transcriptome analysis identifies rewiring patterns of transcriptional regulatory networks in rice under Rhizoctonia solani infection

A Das, M Moin, A Sahu, M Kshattry, PB Kirti, P Barah - Gene, 2022 - Elsevier
Sheath Blight (SB) disease in rice is caused by the infection from the fungal pathogen
Rhizoctonia solani (R. solani). SB is one of the most severe rice diseases that can cause up …