Structural and functional diversity calls for a new classification of ABC transporters
C Thomas, SG Aller, K Beis, EP Carpenter… - FEBS …, 2020 - Wiley Online Library
Members of the ATP‐binding cassette (ABC) transporter superfamily translocate a broad
spectrum of chemically diverse substrates. While their eponymous ATP‐binding cassette in …
spectrum of chemically diverse substrates. While their eponymous ATP‐binding cassette in …
Reintroducing mothur: 10 years later
PD Schloss - Applied and environmental microbiology, 2020 - Am Soc Microbiol
More than 10 years ago, we published the paper describing the mothur software package in
Applied and Environmental Microbiology. Our goal was to create a comprehensive package …
Applied and Environmental Microbiology. Our goal was to create a comprehensive package …
[HTML][HTML] A route to de novo domestication of wild allotetraploid rice
H Yu, T Lin, X Meng, H Du, J Zhang, G Liu, M Chen… - Cell, 2021 - cell.com
Cultivated rice varieties are all diploid, and polyploidization of rice has long been desired
because of its advantages in genome buffering, vigorousness, and environmental …
because of its advantages in genome buffering, vigorousness, and environmental …
[HTML][HTML] A chickpea genetic variation map based on the sequencing of 3,366 genomes
RK Varshney, M Roorkiwal, S Sun, P Bajaj… - Nature, 2021 - nature.com
Zero hunger and good health could be realized by 2030 through effective conservation,
characterization and utilization of germplasm resources. So far, few chickpea (Cicer …
characterization and utilization of germplasm resources. So far, few chickpea (Cicer …
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
Abstract The PathoSystems Resource Integration Center (PATRIC) is the bacterial
Bioinformatics Resource Center funded by the National Institute of Allergy and Infectious …
Bioinformatics Resource Center funded by the National Institute of Allergy and Infectious …
Multiple domestications of Asian rice
CY Jing, FM Zhang, XH Wang, MX Wang, L Zhou, Z Cai… - Nature plants, 2023 - nature.com
The origin of domesticated Asian rice (Oryza sativa L.) has been controversial for more than
half a century. The debates have focused on two leading hypotheses: a single domestication …
half a century. The debates have focused on two leading hypotheses: a single domestication …
[HTML][HTML] Single-cell lineage tracing of metastatic cancer reveals selection of hybrid EMT states
The underpinnings of cancer metastasis remain poorly understood, in part due to a lack of
tools for probing their emergence at high resolution. Here we present macsGESTALT, an …
tools for probing their emergence at high resolution. Here we present macsGESTALT, an …
The landscape of somatic mutation in normal colorectal epithelial cells
H Lee-Six, S Olafsson, P Ellis, RJ Osborne… - Nature, 2019 - nature.com
The colorectal adenoma–carcinoma sequence has provided a paradigmatic framework for
understanding the successive somatic genetic changes and consequent clonal expansions …
understanding the successive somatic genetic changes and consequent clonal expansions …
[HTML][HTML] Progressive Cactus is a multiple-genome aligner for the thousand-genome era
New genome assemblies have been arriving at a rapidly increasing pace, thanks to
decreases in sequencing costs and improvements in third-generation sequencing …
decreases in sequencing costs and improvements in third-generation sequencing …
DAMBE7: New and improved tools for data analysis in molecular biology and evolution
X Xia - Molecular biology and evolution, 2018 - academic.oup.com
DAMBE is a comprehensive software package for genomic and phylogenetic data analysis
on Windows, Linux, and Macintosh computers. New functions include imputing missing …
on Windows, Linux, and Macintosh computers. New functions include imputing missing …