FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices

E Lerner, A Barth, J Hendrix, B Ambrose, V Birkedal… - Elife, 2021 - elifesciences.org
Single-molecule FRET (smFRET) has become a mainstream technique for studying
biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by …

Fluorescence resonance energy transfer-based analytical methods for determination of food contaminants: a review

Y Liang, Y Gong, Y Yu, Q Jiang, J Zhao, H Zou… - Food Control, 2023 - Elsevier
The contaminants in food bring threaten to the safety of food and the health of human. It is
widely known that food contaminants can usually be categorized as the follows, chemical …

Molecular mechanism for the synchronized electrostatic coacervation and co-aggregation of alpha-synuclein and tau

P Gracia, D Polanco, J Tarancón-Díez, I Serra… - Nature …, 2022 - nature.com
Amyloid aggregation of α-synuclein (αS) is the hallmark of Parkinson's disease and other
synucleinopathies. Recently, Tau protein, generally associated with Alzheimer's disease …

[HTML][HTML] Unraveling multi-state molecular dynamics in single-molecule FRET experiments. I. Theory of FRET-lines

A Barth, O Opanasyuk, TO Peulen… - The Journal of …, 2022 - pubs.aip.org
Conformational dynamics of biomolecules are of fundamental importance for their function.
Single-molecule studies of Förster Resonance Energy Transfer (smFRET) between a …

Inside a shell—organometallic catalysis inside encapsulin nanoreactors

P Lohner, M Zmyslia, J Thurn, JK Pape… - Angewandte …, 2021 - Wiley Online Library
Compartmentalization of chemical reactions inside cells are a fundamental requirement for
life. Encapsulins are self‐assembling protein‐based nanocompartments from the prokaryotic …

[HTML][HTML] Unraveling protein's structural dynamics: from configurational dynamics to ensemble switching guides functional mesoscale assemblies

E Medina, DR Latham, H Sanabria - Current opinion in structural biology, 2021 - Elsevier
Highlights•The unanimated visualization of proteins must be revisited to highlights the
relevance of structural dynamics•A combination of single-molecule multiparameter …

UNMIX-ME: spectral and lifetime fluorescence unmixing via deep learning

JT Smith, M Ochoa, X Intes - Biomedical Optics Express, 2020 - opg.optica.org
Hyperspectral fluorescence lifetime imaging allows for the simultaneous acquisition of
spectrally resolved temporal fluorescence emission decays. In turn, the acquired rich …

Simultaneous readout of multiple FRET pairs using photochromism

T Roebroek, W Vandenberg, F Sipieter… - Nature …, 2021 - nature.com
Förster resonant energy transfer (FRET) is a powerful mechanism to probe associations in
situ. Simultaneously performing more than one FRET measurement can be challenging due …

Detecting Förster resonance energy transfer in living cells by conventional and spectral flow cytometry

J Henderson, O Havranek, MCJ Ma, V Herman… - Cytometry Part …, 2022 - Wiley Online Library
Assays based on Förster resonance energy transfer (FRET) can be used to study many
processes in cell biology. Although this is most often done with microscopy for fluorescence …

Pixel-by-pixel autofluorescence corrected FRET in fluorescence microscopy improves accuracy for samples with spatially varied autofluorescence to signal ratio

I Rebenku, CB Lloyd, J Szöllősi, G Vereb - Scientific Reports, 2023 - nature.com
The actual interaction between signaling species in cellular processes is often more
important than their expression levels. Förster resonance energy transfer (FRET) is a …