The RNA tether model for human chromosomal translocation fragile zones

D Liu, CL Hsieh, MR Lieber - Trends in Biochemical Sciences, 2024 - cell.com
One of the two chromosomal breakage events in recurring translocations in B cell
neoplasms is often due to the recombination-activating gene complex (RAG complex) …

[HTML][HTML] Unveiling the Connection: Viral Infections and Genes in dNTP Metabolism

SY Lo, MJ Lai, CH Yang, HC Li - Viruses, 2024 - mdpi.com
Deoxynucleoside triphosphates (dNTPs) are crucial for the replication and maintenance of
genomic information within cells. The balance of the dNTP pool involves several cellular …

Resurrection of 2′-5′-oligoadenylate synthetase 1 (OAS1) from the ancestor of modern horseshoe bats blocks SARS-CoV-2 replication

S Lytras, A Wickenhagen, E Sugrue, DG Stewart… - Plos …, 2023 - journals.plos.org
The prenylated form of the human 2′-5′-oligoadenylate synthetase 1 (OAS1) protein has
been shown to potently inhibit the replication of Severe Acute Respiratory Syndrome …

APOBEC Reporter Systems for Evaluating diNucleotide Editing Levels

AE Rieffer, Y Chen, DJ Salamango, SN Moraes… - The CRISPR …, 2023 - liebertpub.com
Precision genome editing has become a reality with the discovery of base editors. Cytosine
base editor (CBE) technologies are improving rapidly but are mostly optimized for TC …

APOBECs: Our fickle friends?

JP Dudley - PLoS Pathogens, 2023 - journals.plos.org
The apolipoprotein B mRNA-editing catalytic polypeptide-like (APOBEC) family specifies
multiple cytidine deaminases. In mammals, a minimum of 5 genes encode APOBECs 1, 2, 3 …

Human cytomegalovirus mediates APOBEC3B relocalization early during infection through a ribonucleotide reductase-independent mechanism

E Fanunza, AZ Cheng, AA Auerbach… - Journal of …, 2023 - Am Soc Microbiol
The APOBEC3 family of DNA cytosine deaminases comprises an important arm of the innate
antiviral defense system. The gamma-herpesviruses Epstein-Barr virus and Kaposi's …

APOBEC3 family proteins as drivers of virus evolution

M Jonathan, T Ikeda - Frontiers in Virology, 2023 - frontiersin.org
The apolipoprotein B mRNA editing enzyme catalytic polypeptide-like (APOBEC) family
consists of cytosine deaminases implicated in diverse and important biological functions …

Guardian ubiquitin E3 ligases target cancer-associated APOBEC3 deaminases for degradation to promote human genome integrity

I Schwartz, V Budroni, M Meyenberg, H Hornegger… - bioRxiv, 2024 - biorxiv.org
Abstract Highlights RNA-free APOBEC3 (A3) can enter the nucleus, leading to genomic
mutations. Three E3 ligases specifically bind the RNA-binding domain of nuclear A3s …

Uncovering Novel Functions of Viral Accessory Proteins

HT Wong - 2024 - search.proquest.com
Viruses are obligate intracellular pathogens that hijack host cell machinery to facilitate
replication and suppress innate immune responses. Because of their limited genetic …

Genome Engineering Technologies to Characterize the APOBEC Family of Nucleic Acid Mutators

AE Rieffer - 2023 - search.proquest.com
Enzymes require specificity for substrates to overcome passive diffusion and efficiently
conduct complex chemical reactions in biological systems. Only when binding to the correct …