The RNA recognition motif, a plastic RNA‐binding platform to regulate post‐transcriptional gene expression
C Maris, C Dominguez, FHT Allain - The FEBS journal, 2005 - Wiley Online Library
The RNA recognition motif (RRM), also known as RNA‐binding domain (RBD) or
ribonucleoprotein domain (RNP) is one of the most abundant protein domains in eukaryotes …
ribonucleoprotein domain (RNP) is one of the most abundant protein domains in eukaryotes …
Phosphorylation and functions of the RNA polymerase II CTD
HP Phatnani, AL Greenleaf - Genes & development, 2006 - genesdev.cshlp.org
The C-terminal repeat domain (CTD), an unusual extension appended to the C terminus of
the largest subunit of RNA polymerase II, serves as a flexible binding scaffold for numerous …
the largest subunit of RNA polymerase II, serves as a flexible binding scaffold for numerous …
Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II
Set2 methylates Lys36 of histone H3. We show here that yeast Set2 copurifies with RNA
polymerase II (RNAPII). Chromatin immunoprecipitation analyses demonstrated that Set2 …
polymerase II (RNAPII). Chromatin immunoprecipitation analyses demonstrated that Set2 …
Phosphorylation of serine 2 within the RNA polymerase II C-terminal domain couples transcription and 3′ end processing
SH Ahn, M Kim, S Buratowski - Molecular cell, 2004 - cell.com
The largest subunit of RNA polymerase II contains a unique C-terminal domain important for
coupling of transcription and mRNA processing. This domain consists of a repeated …
coupling of transcription and mRNA processing. This domain consists of a repeated …
[HTML][HTML] WW and SH3 domains, two different scaffolds to recognize proline-rich ligands
WW domains are small protein modules composed of approximately 40 amino acids. These
domains fold as a stable, triple stranded β-sheet and recognize proline-containing ligands …
domains fold as a stable, triple stranded β-sheet and recognize proline-containing ligands …
The structure and function of proline recognition domains
One particularly abundant group of modular recognition domains consists of those that bind
proline-rich motifs. Such modules, including the SH3, WW, and EVH1 domains, play a …
proline-rich motifs. Such modules, including the SH3, WW, and EVH1 domains, play a …
The CTD code
S Buratowski - Nature Structural & Molecular Biology, 2003 - nature.com
How does the C-terminal domain (CTD) of RNA polymerase II interact specifically with
multiple targets? A recent paper describing the structure of this domain with a mRNA …
multiple targets? A recent paper describing the structure of this domain with a mRNA …
Mechanism of SMRT corepressor recruitment by the BCL6 BTB domain
BCL6 encodes a transcription factor that represses genes necessary for the terminal
differentiation of lymphocytes within germinal centers, and the misregulated expression of …
differentiation of lymphocytes within germinal centers, and the misregulated expression of …
A field guide to ubiquitylation.
S Fang, AM Weissman - Cellular and molecular life sciences: CMLS, 2004 - europepmc.org
The capacity for exquisite regulation of ubiquitylation provides eukaryotic cells with a means
to fine-tune both protein function and levels. This complex set of processes affects myriad …
to fine-tune both protein function and levels. This complex set of processes affects myriad …
Yes-associated protein (YAP65) interacts with Smad7 and potentiates its inhibitory activity against TGF-β/Smad signaling
O Ferrigno, F Lallemand, F Verrecchia, S L'Hoste… - Oncogene, 2002 - nature.com
Members of the TGF-β family of growth factors signal from the cell surface through
serine/threonine kinase receptors. Intracellular propagation of the signal occurs by …
serine/threonine kinase receptors. Intracellular propagation of the signal occurs by …