Alternative cleavage and polyadenylation: extent, regulation and function

R Elkon, AP Ugalde, R Agami - Nature Reviews Genetics, 2013 - nature.com
The 3′ end of most protein-coding genes and long non-coding RNAs is cleaved and
polyadenylated. Recent discoveries have revealed that a large proportion of these genes …

Genomic imprinting: the emergence of an epigenetic paradigm

AC Ferguson-Smith - Nature Reviews Genetics, 2011 - nature.com
The emerging awareness of the contribution of epigenetic processes to genome function in
health and disease is underpinned by decades of research in model systems. In particular …

De novo DNA methylation: a germ cell perspective

SA Smallwood, G Kelsey - Trends in Genetics, 2012 - cell.com
DNA methylation is a fundamentally important epigenetic modification of the mammalian
genome that has widespread influences on gene expression. During germ-cell specification …

RNA-based gene duplication: mechanistic and evolutionary insights

H Kaessmann, N Vinckenbosch, M Long - Nature Reviews Genetics, 2009 - nature.com
Gene copies that stem from the mRNAs of parental source genes have long been viewed as
evolutionary dead-ends with little biological relevance. Here we review a range of recent …

The primate-specific microRNA gene cluster (C19MC) is imprinted in the placenta

M Noguer-Dance, S Abu-Amero… - Human molecular …, 2010 - academic.oup.com
Imprinted genes play crucial roles in mammalian development and disruption of their
expression is associated with many human disorders including tumourigenesis; yet, the …

Transcription is required for establishment of germline methylation marks at imprinted genes

M Chotalia, SA Smallwood, N Ruf… - Genes & …, 2009 - genesdev.cshlp.org
Genomic imprinting requires the differential marking by DNA methylation of genes in male
and female gametes. In the female germline, acquisition of methylation imprint marks …

New insights into establishment and maintenance of DNA methylation imprints in mammals

G Kelsey, R Feil - … Transactions of the Royal Society B …, 2013 - royalsocietypublishing.org
Fundamental to genomic imprinting in mammals is the acquisition of epigenetic marks that
differ in male and female gametes at 'imprinting control regions'(ICRs). These marks mediate …

The function of non-coding RNAs in genomic imprinting

MV Koerner, FM Pauler, R Huang, DP Barlow - 2009 - journals.biologists.com
Non-coding RNAs (ncRNAs) that regulate gene expression in cis or in trans are a shared
feature of prokaryotic and eukaryotic genomes. In mammals, cis-acting functions are …

The origin and evolution of genomic imprinting and viviparity in mammals

MB Renfree, S Suzuki… - … Transactions of the …, 2013 - royalsocietypublishing.org
Genomic imprinting is widespread in eutherian mammals. Marsupial mammals also have
genomic imprinting, but in fewer loci. It has long been thought that genomic imprinting is …

Conservation of the H19 noncoding RNA and H19-IGF2 imprinting mechanism in therians

G Smits, AJ Mungall, S Griffiths-Jones, P Smith… - Nature …, 2008 - nature.com
Comparisons between eutherians and marsupials suggest limited conservation of the
molecular mechanisms that control genomic imprinting in mammals. We have studied the …