Phylogeny estimation and hypothesis testing using maximum likelihood

JP Huelsenbeck, KA Crandall - Annual Review of Ecology and …, 1997 - annualreviews.org
One of the strengths of the maximum likelihood method of phylogenetic estimation is the
ease with which hypotheses can be formulated and tested. Maximum likelihood analysis of …

The distribution and nature of colour vision among the mammals.

GH Jacobs - Biological Reviews of the Cambridge Philosophical …, 1993 - europepmc.org
1. An oft-cited view, derived principally from the writings of Gordon L. Walls, is that relatively
few mammalian species have a capacity for colour vision. This review has evaluated that …

Inferring the mammal tree: species-level sets of phylogenies for questions in ecology, evolution, and conservation

NS Upham, JA Esselstyn, W Jetz - PLoS biology, 2019 - journals.plos.org
Big, time-scaled phylogenies are fundamental to connecting evolutionary processes to
modern biodiversity patterns. Yet inferring reliable phylogenetic trees for thousands of …

Phylogenetic analysis of covariance by computer simulation

T Garland Jr, AW Dickerman, CM Janis… - Systematic …, 1993 - academic.oup.com
Biologists often compare average phenotypes of groups of species defined cladistically or
on behavioral, ecological, or physiological criteria (eg, carnivores vs. herbivores, social vs …

WWW-query: an on-line retrieval system for biological sequence banks

G Perrière, M Gouy - Biochimie, 1996 - Elsevier
We have developed a World Wide Web (WWW) version of the sequence retrieval system
Query: WWW-Query. This server allows to query nucleotide sequence banks in the …

Simple methods for testing the molecular evolutionary clock hypothesis.

F Tajima - Genetics, 1993 - academic.oup.com
Simple statistical methods for testing the molecular evolutionary clock hypothesis are
developed which can be applied to both nucleotide and amino acid sequences. These …

[图书][B] Molecular evolution: a phylogenetic approach

RDM Page, EC Holmes - 2009 - books.google.com
The study of evolution at the molecular level has given the subject of evolutionary biology a
new significance. Phylogenetic'trees' of gene sequences are a powerful tool for recovering …

Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system

C Saccone, C De Giorgi, C Gissi, G Pesole, A Reyes - Gene, 1999 - Elsevier
One of the most important aspects of mitochondrial (mt) genome evolution in Metazoa is
constancy of size and gene content of mtDNA, whose plasticity is maintained through a great …

[图书][B] Natural kinds and conceptual change

J LaPorte - 2003 - books.google.com
According to the received tradition, the language used to to refer to natural kinds in scientific
discourse remains stable even as theories about these kinds are refined. In this illuminating …

[图书][B] The beginning of the age of mammals

KD Rose - 2006 - books.google.com
In the tradition of GG Simpson's classic work, Kenneth D. Rose's The Beginning of the Age of
Mammals analyzes the events that occurred directly before and after the mysterious KT …