Life-History Evolution and the Genetics of Fitness Components in Drosophila melanogaster

T Flatt - Genetics, 2020 - academic.oup.com
Life-history traits or “fitness components”—such as age and size at maturity, fecundity and
fertility, age-specific rates of survival, and life span—are the major phenotypic determinants …

Inferring population size changes with sequence and SNP data: lessons from human bottlenecks

LM Gattepaille, M Jakobsson, MGB Blum - Heredity, 2013 - nature.com
Reconstructing historical variation of population size from sequence and single-nucleotide
polymorphism (SNP) data is valuable for understanding the evolutionary history of species …

Toward an evolutionarily appropriate null model: jointly inferring demography and purifying selection

P Johri, B Charlesworth, JD Jensen - Genetics, 2020 - academic.oup.com
The relative evolutionary roles of adaptive and non-adaptive processes remain a central
question in population genetics. Resolution of this debate has been difficult as an …

A Thousand Fly Genomes: An Expanded Drosophila Genome Nexus

JB Lack, JD Lange, AD Tang… - Molecular biology …, 2016 - academic.oup.com
Abstract The Drosophila Genome Nexus is a population genomic resource that provides D.
melanogaster genomes from multiple sources. To facilitate comparisons across data sets …

Global Diversity Lines–A Five-Continent Reference Panel of Sequenced Drosophila melanogaster Strains

JK Grenier, JR Arguello, MC Moreira… - G3: Genes …, 2015 - academic.oup.com
Reference collections of multiple Drosophila lines with accumulating collections of “omics”
data have proven especially valuable for the study of population genetics and complex trait …

Secondary contact and local adaptation contribute to genome‐wide patterns of clinal variation in Drosophila melanogaster

AO Bergland, R Tobler, J González… - Molecular …, 2016 - Wiley Online Library
Populations arrayed along broad latitudinal gradients often show patterns of clinal variation
in phenotype and genotype. Such population differentiation can be generated and …

Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource

M Kapun, JCB Nunez… - Molecular biology …, 2021 - academic.oup.com
Drosophila melanogaster is a leading model in population genetics and genomics, and a
growing number of whole-genome data sets from natural populations of this species have …

Demographic Inference Reveals African and European Admixture in the North American Drosophila melanogaster Population

P Duchen, D Živković, S Hutter, W Stephan… - Genetics, 2013 - academic.oup.com
Drosophila melanogaster spread from sub-Saharan Africa to the rest of the world colonizing
new environments. Here, we modeled the joint demography of African (Zimbabwe) …

Demographic divergence history of pied flycatcher and collared flycatcher inferred from whole-genome re-sequencing data

K Nadachowska-Brzyska, R Burri, PI Olason… - PLoS …, 2013 - journals.plos.org
Profound knowledge of demographic history is a prerequisite for the understanding and
inference of processes involved in the evolution of population differentiation and speciation …

Population genomics reveals mechanisms and dynamics of de novo expressed open reading frame emergence in Drosophila melanogaster

A Grandchamp, L Kühl, M Lebherz… - Genome …, 2023 - genome.cshlp.org
Novel genes are essential for evolutionary innovations and differ substantially even between
closely related species. Recently, multiple studies across many taxa showed that some …