Cyclic di-GMP: second messenger extraordinaire

U Jenal, A Reinders, C Lori - Nature Reviews Microbiology, 2017 - nature.com
Cyclic dinucleotides (CDNs) are highly versatile signalling molecules that control various
important biological processes in bacteria. The best-studied example is cyclic di-GMP (c-di …

Biogenesis pathways of RNA guides in archaeal and bacterial CRISPR-Cas adaptive immunity

E Charpentier, H Richter, J van der Oost… - FEMS microbiology …, 2015 - academic.oup.com
CRISPR-Cas is an RNA-mediated adaptive immune system that defends bacteria and
archaea against mobile genetic elements. Short mature CRISPR RNAs (crRNAs) are key …

Rfam 14: expanded coverage of metagenomic, viral and microRNA families

I Kalvari, EP Nawrocki… - Nucleic Acids …, 2021 - academic.oup.com
Rfam is a database of RNA families where each of the 3444 families is represented by a
multiple sequence alignment of known RNA sequences and a covariance model that can be …

The discovery, mechanisms, and evolutionary impact of anti-CRISPRs

AL Borges, AR Davidson… - Annual review of …, 2017 - annualreviews.org
Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves
from infection by bacteriophages (phages). These RNA-guided nucleases are powerful …

Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis

T Cortes, OT Schubert, G Rose, KB Arnvig, I Comas… - Cell reports, 2013 - cell.com
Deciphering physiological changes that mediate transition of Mycobacterium tuberculosis
between replicating and nonreplicating states is essential to understanding how the …

The Regulatory Networks That Control Clostridium difficile Toxin Synthesis

I Martin-Verstraete, J Peltier, B Dupuy - Toxins, 2016 - mdpi.com
The pathogenic clostridia cause many human and animal diseases, which typically arise as
a consequence of the production of potent exotoxins. Among the enterotoxic clostridia …

When a virus is not a parasite: the beneficial effects of prophages on bacterial fitness

J Bondy-Denomy, AR Davidson - Journal of microbiology, 2014 - Springer
Most organisms on the planet have viruses that infect them. Viral infection may lead to cell
death, or to a symbiotic relationship where the genomes of both virus and host replicate …

Virulence factors of Clostridium difficile and their role during infection

C Janoir - Anaerobe, 2016 - Elsevier
Clostridium difficile is the prominent etiological agent of healthcare-associated diarrhea. The
disease symptoms range from mild diarrhea to life-threatening pseudomembranous colitis …

Bacterial signal transduction by cyclic di-GMP and other nucleotide second messengers

R Hengge, A Gründling, U Jenal, R Ryan… - Journal of …, 2016 - Am Soc Microbiol
ABSTRACT The first International Symposium on c-Di-GMP Signaling in Bacteria (22 to 25
March 2015, Harnack-Haus, Berlin, Germany) brought together 131 molecular …

A microbiota-generated bile salt induces biofilm formation in Clostridium difficile

T Dubois, YDN Tremblay, A Hamiot… - NPJ biofilms and …, 2019 - nature.com
Clostridium difficile is a major cause of nosocomial infections. Bacterial persistence in the
gut is responsible for infection relapse; sporulation and other unidentified mechanisms …