Evolutionary pathways and trajectories in antibiotic resistance

F Baquero, JL Martinez, V F. Lanza… - Clinical Microbiology …, 2021 - Am Soc Microbiol
Evolution is the hallmark of life. Descriptions of the evolution of microorganisms have
provided a wealth of information, but knowledge regarding “what happened” has precluded …

Identification of bacterial plasmids based on mobility and plasmid population biology

MP Garcillán-Barcia, A Alvarado… - FEMS microbiology …, 2011 - academic.oup.com
Plasmids contain a backbone of core genes that remains relatively stable for long
evolutionary periods, making sense to speak about plasmid species. The identification and …

Persistence and reversal of plasmid-mediated antibiotic resistance

AJ Lopatkin, HR Meredith, JK Srimani, C Pfeiffer… - Nature …, 2017 - nature.com
In the absence of antibiotic-mediated selection, sensitive bacteria are expected to displace
their resistant counterparts if resistance genes are costly. However, many resistance genes …

Intra-and interpopulation transposition of mobile genetic elements driven by antibiotic selection

Y Yao, R Maddamsetti, A Weiss, Y Ha… - Nature Ecology & …, 2022 - nature.com
The spread of genes encoding antibiotic resistance is often mediated by horizontal gene
transfer (HGT). Many of these genes are associated with transposons, a type of mobile …

Role of Capsule and O Antigen in the Virulence of Uropathogenic Escherichia coli

S Sarkar, GC Ulett, M Totsika, MD Phan, MA Schembri - PloS one, 2014 - journals.plos.org
Urinary tract infection (UTI) is one of the most common bacterial infections in humans, with
uropathogenic Escherichia coli (UPEC) the leading causative organism. UPEC has a …

The Dynamics of the Antimicrobial Resistance Mobilome of Salmonella enterica and Related Enteric Bacteria

S Algarni, SC Ricke, SL Foley, J Han - Frontiers in Microbiology, 2022 - frontiersin.org
The foodborne pathogen Salmonella enterica is considered a global public health risk.
Salmonella enterica isolates can develop resistance to several antimicrobial drugs due to …

Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli

N Stoesser, AE Sheppard, G Peirano, LW Anson… - Scientific reports, 2017 - nature.com
The dissemination of carbapenem resistance in Escherichia coli has major implications for
the management of common infections. bla KPC, encoding a transmissible carbapenemase …

Mathematical models of plasmid population dynamics

JCR Hernández-Beltrán, A San Millán… - Frontiers in …, 2021 - frontiersin.org
With plasmid-mediated antibiotic resistance thriving and threatening to become a serious
public health problem, it is paramount to increase our understanding of the forces that …

A mathematician's guide to plasmids: an introduction to plasmid biology for modellers

I Dewan, H Uecker - Microbiology, 2023 - microbiologyresearch.org
Plasmids, extrachromosomal DNA molecules commonly found in bacterial and archaeal
cells, play an important role in bacterial genetics and evolution. Our understanding of …

Plasmid characteristics modulate the propensity of gene exchange in bacterial vesicles

F Tran, JQ Boedicker - Journal of bacteriology, 2019 - Am Soc Microbiol
Horizontal gene transfer is responsible for the exchange of many types of genetic elements,
including plasmids. Properties of the exchanged genetic element are known to influence the …