A critical review of bottom-up proteomics: the good, the bad, and the future of this field

EJ Dupree, M Jayathirtha, H Yorkey, M Mihasan… - Proteomes, 2020 - mdpi.com
Proteomics is the field of study that includes the analysis of proteins, from either a basic
science prospective or a clinical one. Proteins can be investigated for their abundance …

Recent advances of small extracellular vesicle biomarkers in breast cancer diagnosis and prognosis

Y Lee, J Ni, J Beretov, VC Wasinger, P Graham, Y Li - Molecular cancer, 2023 - Springer
Current clinical tools for breast cancer (BC) diagnosis are insufficient but liquid biopsy of
different bodily fluids has recently emerged as a minimally invasive strategy that provides a …

Decreasing the amount of trypsin in in-gel digestion leads to diminished chemical noise and improved protein identifications

M Hu, Y Liu, K Yu, X Liu - Journal of proteomics, 2014 - Elsevier
Pre-fractionation by gel electrophoresis is often combined with liquid chromatography–mass
spectrometry (LC–MS) for large-scale profiling of complex protein samples. An essential …

Pathophysiology of tobacco smoke exposure: recent insights from comparative and redox proteomics

G Colombo, M Clerici, D Giustarini… - Mass spectrometry …, 2014 - Wiley Online Library
First‐hand and second‐hand tobacco smoke are causally linked to a huge number of deaths
and are responsible for a broad spectrum of pathologies such as cancer, cardiovascular …

Exposure to acids changes the proteomic of acquired dentine pellicle

TR Delecrode, WL Siqueira, FC Zaidan, MR Bellini… - Journal of dentistry, 2015 - Elsevier
Objectives For the first time, this study characterized the proteome of the acquired pellicle
formed on human dentine. The changes in this proteome after exposure to lactic or citric acid …

Investigating an increase in Florida manatee mortalities using a proteomic approach

R Lazensky, C Silva-Sanchez, KJ Kroll, M Chow… - Scientific Reports, 2021 - nature.com
Two large-scale Florida manatee (Trichechus manatus latirostris) mortality episodes were
reported on separate coasts of Florida in 2013. The east coast mortality episode was …

Collagen–cellulose composite thin films that mimic soft-tissue and allow stem-cell orientation

TWJ Steele, CL Huang, E Nguyen, U Sarig… - Journal of Materials …, 2013 - Springer
Mechanical properties of collagen films are less than ideal for biomaterial development
towards musculoskeletal repair or cardiovascular applications. Herein, we present a …

Extracellular heat shock protein A9 is a novel interaction partner of podoplanin in oral squamous cell carcinoma cells

M Tsuneki, S Maruyama, M Yamazaki, B Xu… - Biochemical and …, 2013 - Elsevier
In previous studies, we have shown several lines of evidence that podoplanin (PDPN) plays
an important role in cell adhesion via its association with extracellular components in …

Behavioral and Proteomic Analysis of Stress Response in Zebrafish (Danio rerio)

S Magdeldin, RE Blaser, T Yamamoto… - Journal of Proteome …, 2015 - ACS Publications
The purpose of this study is to determine the behavioral and proteomic consequences of
shock-induced stress in zebrafish (Danio rerio) as a vertebrate model. Here we describe the …

Hen egg white lysozyme is a hidden allergen in Italian commercial ciders

F Mainente, B Simonato, G Pasini… - Food Additives & …, 2017 - Taylor & Francis
Hen egg white lysozyme (HEWL) is an enzyme used in alcoholic fermentation for its ability to
control the growth of Gram-positive and spoilage bacteria, without inhibiting yeast growth …