The population genetics of pathogenic Escherichia coli
E Denamur, O Clermont, S Bonacorsi… - Nature Reviews …, 2021 - nature.com
Escherichia coli is a commensal of the vertebrate gut that is increasingly involved in various
intestinal and extra-intestinal infections as an opportunistic pathogen. Numerous pathotypes …
intestinal and extra-intestinal infections as an opportunistic pathogen. Numerous pathotypes …
Virulence factors, prevalence and potential transmission of extraintestinal pathogenic Escherichia coli isolated from different sources: recent reports
J Sarowska, B Futoma-Koloch, A Jama-Kmiecik… - Gut pathogens, 2019 - Springer
Extraintestinal pathogenic E. coli (ExPEC) are facultative pathogens that are part of the
normal human intestinal flora. The ExPEC group includes uropathogenic E. coli (UPEC) …
normal human intestinal flora. The ExPEC group includes uropathogenic E. coli (UPEC) …
The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity
EnteroBase is an integrated software environment that supports the identification of global
population structures within several bacterial genera that include pathogens. Here, we …
population structures within several bacterial genera that include pathogens. Here, we …
Genomics and pathotypes of the many faces of Escherichia coli
J Geurtsen, M de Been, E Weerdenburg… - FEMS microbiology …, 2022 - academic.oup.com
Escherichia coli is the most researched microbial organism in the world. Its varied impact on
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …
Environmental Escherichia coli: ecology and public health implications—a review
J Jang, HG Hur, MJ Sadowsky… - Journal of applied …, 2017 - academic.oup.com
Escherichia coli is classified as a rod‐shaped, Gram‐negative bacterium in the family
Enterobacteriaceae. The bacterium mainly inhabits the lower intestinal tract of warm …
Enterobacteriaceae. The bacterium mainly inhabits the lower intestinal tract of warm …
ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping
J Beghain, A Bridier-Nahmias… - Microbial …, 2018 - microbiologyresearch.org
The genus Escherichia is composed of Escherichia albertii, E. fergusonii, five cryptic
Escherichia clades and E. coli sensu stricto. Furthermore, the E. coli species can be divided …
Escherichia clades and E. coli sensu stricto. Furthermore, the E. coli species can be divided …
Escherichia coli Pathobionts Associated with Inflammatory Bowel Disease
HC Mirsepasi-Lauridsen, BA Vallance… - Clinical microbiology …, 2019 - Am Soc Microbiol
Gut bacteria play a key role in initiating and maintaining the inflammatory process in the gut
tissues of inflammatory bowel disease (IBD) patients, by supplying antigens or other …
tissues of inflammatory bowel disease (IBD) patients, by supplying antigens or other …
Escherichia coli ST131, an intriguing clonal group
MH Nicolas-Chanoine, X Bertrand… - Clinical microbiology …, 2014 - Am Soc Microbiol
In 2008, a previously unknown Escherichia coli clonal group, sequence type 131 (ST131),
was identified on three continents. Today, ST131 is the predominant E. coli lineage among …
was identified on three continents. Today, ST131 is the predominant E. coli lineage among …
Urinary tract infection: Pathogenicity, antibiotic resistance and development of effective vaccines against Uropathogenic Escherichia coli
Urinary tract infections (UTIs) are recognized as one of the most common infectious
diseases in the world that can be divided to different types. Uropathogenic Escherichia coli …
diseases in the world that can be divided to different types. Uropathogenic Escherichia coli …
Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
JP Meier-Kolthoff, RL Hahnke, J Petersen… - Standards in genomic …, 2014 - Springer
Although Escherichia coli is the most widely studied bacterial model organism and often
considered to be the model bacterium per se, its type strain was until now forgotten from …
considered to be the model bacterium per se, its type strain was until now forgotten from …