A comprehensive overview of cotton genomics, biotechnology and molecular biological studies

X Wen, Z Chen, Z Yang, M Wang, S Jin, G Wang… - Science China Life …, 2023 - Springer
Cotton is an irreplaceable economic crop currently domesticated in the human world for its
extremely elongated fiber cells specialized in seed epidermis, which makes it of high …

Insights into drought stress signaling in plants and the molecular genetic basis of cotton drought tolerance

T Mahmood, S Khalid, M Abdullah, Z Ahmed… - Cells, 2019 - mdpi.com
Drought stress restricts plant growth and development by altering metabolic activity and
biological functions. However, plants have evolved several cellular and molecular …

Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement

ZJ Chen, A Sreedasyam, A Ando, Q Song… - Nature …, 2020 - nature.com
Polyploidy is an evolutionary innovation for many animals and all flowering plants, but its
impact on selection and domestication remains elusive. Here we analyze genome evolution …

An overview of salinity stress, mechanism of salinity tolerance and strategies for its management in cotton

Z Maryum, T Luqman, S Nadeem… - Frontiers in Plant …, 2022 - frontiersin.org
Salinity stress is one of the primary threats to agricultural crops resulting in impaired crop
growth and development. Although cotton is considered as reasonably salt tolerant, it is …

Epigenomic and functional analyses reveal roles of epialleles in the loss of photoperiod sensitivity during domestication of allotetraploid cottons

Q Song, T Zhang, DM Stelly, ZJ Chen - Genome biology, 2017 - Springer
Background Polyploidy is a pervasive evolutionary feature of all flowering plants and some
animals, leading to genetic and epigenetic changes that affect gene expression and …

DNA hypomethylation in tetraploid rice potentiates stress-responsive gene expression for salt tolerance

L Wang, S Cao, P Wang, K Lu… - Proceedings of the …, 2021 - National Acad Sciences
Polyploidy is a prominent feature for genome evolution in many animals and all flowering
plants. Plant polyploids often show enhanced fitness in diverse and extreme environments …

Altered chromatin architecture and gene expression during polyploidization and domestication of soybean

L Wang, G Jia, X Jiang, S Cao, ZJ Chen… - The Plant Cell, 2021 - academic.oup.com
Polyploidy or whole-genome duplication (WGD) is widespread in plants and is a key driver
of evolution and speciation, accompanied by rapid and dynamic changes in genomic …

Small interfering RNAs from bidirectional transcripts of GhMML3_A12 regulate cotton fiber development

Q Wan, X Guan, N Yang, H Wu, M Pan, B Liu… - New …, 2016 - Wiley Online Library
Natural antisense transcripts (NAT s) are commonly observed in eukaryotic genomes, but
only a limited number of such genes have been identified as being involved in gene …

Asymmetric variation in DNA methylation during domestication and de-domestication of rice

S Cao, K Chen, K Lu, S Chen, X Zhang, C Shen… - The Plant …, 2023 - academic.oup.com
Hundreds of plant species have been domesticated to feed human civilization, while some
crops have undergone de-domestication into agricultural weeds, threatening global food …

Dynamic 3D genome architecture of cotton fiber reveals subgenome-coordinated chromatin topology for 4-staged single-cell differentiation

L Pei, X Huang, Z Liu, X Tian, J You, J Li, DD Fang… - Genome biology, 2022 - Springer
Background Despite remarkable advances in our knowledge of epigenetically mediated
transcriptional programming of cell differentiation in plants, little is known about chromatin …