Multiscale agent-based and hybrid modeling of the tumor immune microenvironment
Multiscale systems biology and systems pharmacology are powerful methodologies that are
playing increasingly important roles in understanding the fundamental mechanisms of …
playing increasingly important roles in understanding the fundamental mechanisms of …
Agent‐based modeling of the immune system: NetLogo, a promising framework
Several components that interact with each other to evolve a complex, and, in some cases,
unexpected behavior, represents one of the main and fascinating features of the mammalian …
unexpected behavior, represents one of the main and fascinating features of the mammalian …
Mathematical modeling of biological systems
S Motta, F Pappalardo - Briefings in Bioinformatics, 2013 - academic.oup.com
Mathematical and computational models are increasingly used to help interpret biomedical
data produced by high-throughput genomics and proteomics projects. The application of …
data produced by high-throughput genomics and proteomics projects. The application of …
Digital pathology analysis quantifies spatial heterogeneity of CD3, CD4, CD8, CD20, and FoxP3 immune markers in triple-negative breast cancer
Overwhelming evidence has shown the significant role of the tumor microenvironment (TME)
in governing the triple-negative breast cancer (TNBC) progression. Digital pathology can …
in governing the triple-negative breast cancer (TNBC) progression. Digital pathology can …
Relaxation estimation of RMSD in molecular dynamics immunosimulations
W Schreiner, R Karch, B Knapp… - … mathematical methods in …, 2012 - Wiley Online Library
Molecular dynamics simulations have to be sufficiently long to draw reliable conclusions.
However, no method exists to prove that a simulation has converged. We suggest the …
However, no method exists to prove that a simulation has converged. We suggest the …
[HTML][HTML] Tuberculosis disease diagnosis using artificial immune recognition system
S Shamshirband, S Hessam, H Javidnia… - … journal of medical …, 2014 - ncbi.nlm.nih.gov
Materials and Methods: Patient epicrisis reports obtained from the Pasteur Laboratory in the
north of Iran were used. All 175 samples have twenty features. The features are classified …
north of Iran were used. All 175 samples have twenty features. The features are classified …
Persistence analysis in a Kolmogorov-type model for cancer-immune system competition
C Bianca, F Pappalardo, M Pennisi… - AIP Conference …, 2013 - pubs.aip.org
This paper is concerned with analytical investigations on the competition between cancer
cells and immune system cells. Specifically the role of the B-cells and T-cells in the evolution …
cells and immune system cells. Specifically the role of the B-cells and T-cells in the evolution …
Thermostatted kinetic equations as models for complex systems in physics and life sciences
C Bianca - Physics of Life Reviews, 2012 - Elsevier
Statistical mechanics is a powerful method for understanding equilibrium thermodynamics.
An equivalent theoretical framework for nonequilibrium systems has remained elusive. The …
An equivalent theoretical framework for nonequilibrium systems has remained elusive. The …
Computational modelling approaches to vaccinology
Abstract Excepting the Peripheral and Central Nervous Systems, the Immune System is the
most complex of somatic systems in higher animals. This complexity manifests itself at many …
most complex of somatic systems in higher animals. This complexity manifests itself at many …
Mathematical modeling of the immune system recognition to mammary carcinoma antigen
The definition of artificial immunity, realized through vaccinations, is nowadays a practice
widely developed in order to eliminate cancer disease. The present paper deals with an …
widely developed in order to eliminate cancer disease. The present paper deals with an …