Active Brownian particles: From individual to collective stochastic dynamics
We review theoretical models of individual motility as well as collective dynamics and
pattern formation of active particles. We focus on simple models of active dynamics with a …
pattern formation of active particles. We focus on simple models of active dynamics with a …
Approaching complexity by stochastic methods: From biological systems to turbulence
This review addresses a central question in the field of complex systems: given a fluctuating
(in time or space), sequentially measured set of experimental data, how should one analyze …
(in time or space), sequentially measured set of experimental data, how should one analyze …
[HTML][HTML] Cell migration guided by long-lived spatial memory
J d'Alessandro, A Barbier--Chebbah, V Cellerin… - Nature …, 2021 - nature.com
Living cells actively migrate in their environment to perform key biological functions—from
unicellular organisms looking for food to single cells such as fibroblasts, leukocytes or …
unicellular organisms looking for food to single cells such as fibroblasts, leukocytes or …
Learning dynamical models of single and collective cell migration: a review
D Brückner, CP Broedersz - Reports on Progress in Physics, 2024 - iopscience.iop.org
Single and collective cell migration are fundamental processes critical for physiological
phenomena ranging from embryonic development and immune response to wound healing …
phenomena ranging from embryonic development and immune response to wound healing …
Biased excitable networks: how cells direct motion in response to gradients
PA Iglesias, PN Devreotes - Current opinion in cell biology, 2012 - Elsevier
The actin cytoskeleton in motile cells has many of the hallmarks of an excitable medium,
including the presence of propagating waves. This excitable behavior can account for the …
including the presence of propagating waves. This excitable behavior can account for the …
Power spectral density of a single Brownian trajectory: what one can and cannot learn from it
The power spectral density (PSD) of any time-dependent stochastic process X t is a
meaningful feature of its spectral content. In its text-book definition, the PSD is the Fourier …
meaningful feature of its spectral content. In its text-book definition, the PSD is the Fourier …
'Dicty dynamics': Dictyostelium motility as persistent random motion
L Li, EC Cox, H Flyvbjerg - Physical biology, 2011 - iopscience.iop.org
We model the motility of Dictyostelium cells in a systematic data-driven manner. We deduce
a minimal dynamical model that reproduces the statistical features of experimental …
a minimal dynamical model that reproduces the statistical features of experimental …
Non-Markovian data-driven modeling of single-cell motility
BG Mitterwallner, C Schreiber, JO Daldrop, JO Rädler… - Physical Review E, 2020 - APS
Trajectories of human breast cancer cells moving on one-dimensional circular tracks are
modeled by the non-Markovian version of the Langevin equation that includes an arbitrary …
modeled by the non-Markovian version of the Langevin equation that includes an arbitrary …
Non-Gaussianity, population heterogeneity, and transient superdiffusion in the spreading dynamics of amoeboid cells
What is the underlying diffusion process governing the spreading dynamics and search
strategies employed by amoeboid cells? Based on the statistical analysis of experimental …
strategies employed by amoeboid cells? Based on the statistical analysis of experimental …
[HTML][HTML] Interaction of motility, directional sensing, and polarity modules recreates the behaviors of chemotaxing cells
Chemotaxis involves the coordinated action of separable but interrelated processes: motility,
gradient sensing, and polarization. We have hypothesized that these are mediated by …
gradient sensing, and polarization. We have hypothesized that these are mediated by …