Active Brownian particles: From individual to collective stochastic dynamics

P Romanczuk, M Bär, W Ebeling, B Lindner… - The European Physical …, 2012 - Springer
We review theoretical models of individual motility as well as collective dynamics and
pattern formation of active particles. We focus on simple models of active dynamics with a …

Approaching complexity by stochastic methods: From biological systems to turbulence

R Friedrich, J Peinke, M Sahimi, MRR Tabar - Physics Reports, 2011 - Elsevier
This review addresses a central question in the field of complex systems: given a fluctuating
(in time or space), sequentially measured set of experimental data, how should one analyze …

[HTML][HTML] Cell migration guided by long-lived spatial memory

J d'Alessandro, A Barbier--Chebbah, V Cellerin… - Nature …, 2021 - nature.com
Living cells actively migrate in their environment to perform key biological functions—from
unicellular organisms looking for food to single cells such as fibroblasts, leukocytes or …

Learning dynamical models of single and collective cell migration: a review

D Brückner, CP Broedersz - Reports on Progress in Physics, 2024 - iopscience.iop.org
Single and collective cell migration are fundamental processes critical for physiological
phenomena ranging from embryonic development and immune response to wound healing …

Biased excitable networks: how cells direct motion in response to gradients

PA Iglesias, PN Devreotes - Current opinion in cell biology, 2012 - Elsevier
The actin cytoskeleton in motile cells has many of the hallmarks of an excitable medium,
including the presence of propagating waves. This excitable behavior can account for the …

Power spectral density of a single Brownian trajectory: what one can and cannot learn from it

D Krapf, E Marinari, R Metzler, G Oshanin… - New Journal of …, 2018 - iopscience.iop.org
The power spectral density (PSD) of any time-dependent stochastic process X t is a
meaningful feature of its spectral content. In its text-book definition, the PSD is the Fourier …

'Dicty dynamics': Dictyostelium motility as persistent random motion

L Li, EC Cox, H Flyvbjerg - Physical biology, 2011 - iopscience.iop.org
We model the motility of Dictyostelium cells in a systematic data-driven manner. We deduce
a minimal dynamical model that reproduces the statistical features of experimental …

Non-Markovian data-driven modeling of single-cell motility

BG Mitterwallner, C Schreiber, JO Daldrop, JO Rädler… - Physical Review E, 2020 - APS
Trajectories of human breast cancer cells moving on one-dimensional circular tracks are
modeled by the non-Markovian version of the Langevin equation that includes an arbitrary …

Non-Gaussianity, population heterogeneity, and transient superdiffusion in the spreading dynamics of amoeboid cells

AG Cherstvy, O Nagel, C Beta, R Metzler - … Chemistry Chemical Physics, 2018 - pubs.rsc.org
What is the underlying diffusion process governing the spreading dynamics and search
strategies employed by amoeboid cells? Based on the statistical analysis of experimental …

[HTML][HTML] Interaction of motility, directional sensing, and polarity modules recreates the behaviors of chemotaxing cells

C Shi, CH Huang, PN Devreotes… - PLoS computational …, 2013 - journals.plos.org
Chemotaxis involves the coordinated action of separable but interrelated processes: motility,
gradient sensing, and polarization. We have hypothesized that these are mediated by …