How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria

J Deutscher, C Francke, PW Postma - Microbiology and molecular …, 2006 - Am Soc Microbiol
The phosphoenolpyruvate (PEP): carbohydrate phosphotransferase system (PTS) is found
only in bacteria, where it catalyzes the transport and phosphorylation of numerous …

CcpA-dependent carbon catabolite repression in bacteria

JB Warner, JS Lolkema - Microbiology and Molecular Biology …, 2003 - Am Soc Microbiol
Carbon catabolite repression (CCR) by transcriptional regulators follows different
mechanisms in gram-positive and gram-negative bacteria. In gram-positive bacteria, CcpA …

CAPRI: a critical assessment of predicted interactions

J Janin, K Henrick, J Moult, LT Eyck… - Proteins: Structure …, 2003 - Wiley Online Library
CAPRI is a communitywide experiment to assess the capacity of protein‐docking methods to
predict protein–protein interactions. Nineteen groups participated in rounds 1 and 2 of …

On the emergence of P-Loop NTPase and Rossmann enzymes from a Beta-Alpha-Beta ancestral fragment

LM Longo, J Jabłońska, P Vyas, M Kanade, R Kolodny… - Elife, 2020 - elifesciences.org
This article is dedicated to the memory of Michael G. Rossmann. Dating back to the last
universal common ancestor, P-loop NTPases and Rossmanns comprise the most ubiquitous …

Bacterial tyrosine kinases: evolution, biological function and structural insights

C Grangeasse, S Nessler… - … Transactions of the …, 2012 - royalsocietypublishing.org
Reversible protein phosphorylation is a major mechanism in the regulation of fundamental
signalling events in all living organisms. Bacteria have been shown to possess a versatile …

A model for statistical significance of local similarities in structure

A Stark, S Sunyaev, RB Russell - Journal of molecular biology, 2003 - Elsevier
Structural biology can provide three-dimensional structures for proteins of unknown function.
When sequence or structure comparisons fail to suggest a function, insights can come from …

Ser/Thr/Tyr protein phosphorylation in bacteria–for long time neglected, now well established

J Deutscher, MH Saier Jr - Journal of molecular microbiology and …, 2005 - karger.com
The first clearly established example of Ser/Thr/Tyr phosphorylation of a bacterial protein
was isocitrate dehydrogenase. In 1979, 25 years after the discovery of protein …

Dynamic dissociating homo-oligomers and the control of protein function

T Selwood, EK Jaffe - Archives of Biochemistry and Biophysics, 2012 - Elsevier
Homo-oligomeric protein assemblies are known to participate in dynamic association/
disassociation equilibria under native conditions, thus creating an equilibrium of assembly …

Morpheeins–a new structural paradigm for allosteric regulation

EK Jaffe - Trends in biochemical sciences, 2005 - cell.com
Classic models for the allosteric regulation of protein function consider an equilibrium
among protein structures of constant oligomeric multiplicity. The morpheein (mor-phee'-in) …

Pyrophosphate-producing protein dephosphorylation by HPr kinase/phosphorylase: a relic of early life?

I Mijakovic, S Poncet, A Galinier… - Proceedings of the …, 2002 - National Acad Sciences
In most Gram-positive bacteria, serine-46-phosphorylated HPr (P-Ser-HPr) controls the
expression of numerous catabolic genes (≈ 10% of their genome) by acting as catabolite …