Bax, Bak and beyond—mitochondrial performance in apoptosis

A Peña‐Blanco, AJ García‐Sáez - The FEBS journal, 2018 - Wiley Online Library
Bax and Bak are members of the Bcl‐2 family and core regulators of the intrinsic pathway of
apoptosis. Upon apoptotic stimuli, they are activated and oligomerize at the mitochondrial …

A fate worse than death: apoptosis as an oncogenic process

G Ichim, SWG Tait - Nature Reviews Cancer, 2016 - nature.com
Apoptotic cell death is widely considered a positive process that both prevents and treats
cancer. Although undoubtedly having a beneficial role, paradoxically, apoptosis can also …

[HTML][HTML] Limited mitochondrial permeabilization causes DNA damage and genomic instability in the absence of cell death

G Ichim, J Lopez, SU Ahmed, N Muthalagu… - Molecular cell, 2015 - cell.com
During apoptosis, the mitochondrial outer membrane is permeabilized, leading to the
release of cytochrome c that activates downstream caspases. Mitochondrial outer …

Long noncoding RNA: a dazzling dancer in tumor immune microenvironment

Y Zhang, Q Liu, Q Liao - Journal of Experimental & Clinical Cancer …, 2020 - Springer
Long noncoding RNAs (lncRNAs) are a class of endogenous, non-protein coding RNAs that
are highly linked to various cellular functions and pathological process. Emerging evidence …

Programming biological models in Python using PySB

CF Lopez, JL Muhlich, JA Bachman… - Molecular systems …, 2013 - embopress.org
Mathematical equations are fundamental to modeling biological networks, but as networks
get large and revisions frequent, it becomes difficult to manage equations directly or to …

Measuring and modeling apoptosis in single cells

SL Spencer, PK Sorger - Cell, 2011 - cell.com
Cell death plays an essential role in the development of tissues and organisms, the etiology
of disease, and the responses of cells to therapeutic drugs. Here we review progress made …

Down‐regulated lncRNA SBF2‐AS1 in M2 macrophage‐derived exosomes elevates miR‐122‐5p to restrict XIAP, thereby limiting pancreatic cancer development

Z Yin, Y Zhou, T Ma, S Chen, N Shi… - Journal of cellular …, 2020 - Wiley Online Library
Evidence has indicated that M2 macrophages promote the progression of cancers, but few
focus on the ability of M2 macrophage‐derived exosomes in pancreatic cancer (PC). This …

[HTML][HTML] Quantitative analysis of pathways controlling extrinsic apoptosis in single cells

JG Albeck, JM Burke, BB Aldridge, M Zhang… - Molecular cell, 2008 - cell.com
Apoptosis in response to TRAIL or TNF requires the activation of initiator caspases, which
then activate the effector caspases that dismantle cells and cause death. However, little is …

Modeling a snap-action, variable-delay switch controlling extrinsic cell death

JG Albeck, JM Burke, SL Spencer… - PLoS …, 2008 - journals.plos.org
When exposed to tumor necrosis factor (TNF) or TNF-related apoptosis-inducing ligand
(TRAIL), a closely related death ligand and investigational therapeutic, cells enter a …

Mitochondrial function and Parkinson's disease: from the perspective of the electron transport chain

JL Li, TY Lin, PL Chen, TN Guo, SY Huang… - Frontiers in molecular …, 2021 - frontiersin.org
Parkinson's disease (PD) is known as a mitochondrial disease. Some even regarded it
specifically as a disorder of the complex I of the electron transport chain (ETC). The ETC is …