The role of DNA damage and repair in aging through the prism of Koch-like criteria

AA Moskalev, MV Shaposhnikov, EN Plyusnina… - Ageing research …, 2013 - Elsevier
Since the first publication on Somatic Mutation Theory of Aging (Szilárd, 1959), a great
volume of knowledge in the field has been accumulated. Here we attempted to organize the …

Genome instability and aging

J Vijg, Y Suh - Annual review of physiology, 2013 - annualreviews.org
Genome instability has long been implicated as the main causal factor in aging. Somatic
cells are continuously exposed to various sources of DNA damage, from reactive oxygen …

Landscape of pathogenic mutations in premature ovarian insufficiency

H Ke, S Tang, T Guo, D Hou, X Jiao, S Li, W Luo… - Nature Medicine, 2023 - nature.com
Premature ovarian insufficiency (POI) is a major cause of female infertility due to early loss of
ovarian function. POI is a heterogeneous condition, and its molecular etiology is unclear. To …

Total body irradiation or chemotherapy conditioning in childhood ALL: a multinational, randomized, noninferiority phase III study

C Peters, JH Dalle, F Locatelli, U Poetschger… - Journal of Clinical …, 2021 - ascopubs.org
PURPOSE Total body irradiation (TBI) before allogeneic hematopoietic stem cell
transplantation (HSCT) in pediatric patients with acute lymphoblastic leukemia (ALL) is …

Targeting DNA repair pathways for cancer treatment: what's new?

MR Kelley, D Logsdon, ML Fishel - Future Oncology, 2014 - Taylor & Francis
Disruptions in DNA repair pathways predispose cells to accumulating DNA damage. A
growing body of evidence indicates that tumors accumulate progressively more mutations in …

Targeting repair pathways with small molecules increases precise genome editing in pluripotent stem cells

S Riesenberg, T Maricic - Nature communications, 2018 - nature.com
A now frequently used method to edit mammalian genomes uses the nucleases
CRISPR/Cas9 and CRISPR/Cpf1 or the nickase CRISPR/Cas9n to introduce double-strand …

Mutational analysis of 472 urothelial carcinoma across grades and anatomic sites

AH Nassar, R Umeton, J Kim, K Lundgren… - Clinical Cancer …, 2019 - AACR
Purpose: The purpose of this study is to characterize the mutational landscape across the
spectrum of urothelial carcinoma (UC) to identify mutational features and potential …

[HTML][HTML] DNA repair in species with extreme lifespan differences

SL MacRae, MMK Croken, RB Calder, A Aliper… - Aging (Albany …, 2015 - ncbi.nlm.nih.gov
Differences in DNA repair capacity have been hypothesized to underlie the great range of
maximum lifespans among mammals. However, measurements of individual DNA repair …

A model combining clinical and genomic factors to predict response to PD-1/PD-L1 blockade in advanced urothelial carcinoma

AH Nassar, KW Mouw, O Jegede, AB Shinagare… - British journal of …, 2020 - nature.com
Background In metastatic urothelial carcinoma (mUC), predictive biomarkers that correlate
with response to immune checkpoint inhibitors (ICIs) are lacking. Here, we interrogated …

DNAmod: the DNA modification database

AJ Sood, C Viner, MM Hoffman - Journal of cheminformatics, 2019 - Springer
Covalent DNA modifications, such as 5-methylcytosine (5mC), are increasingly the focus of
numerous research programs. In eukaryotes, both 5mC and 5-hydroxymethylcytosine …