Classes of explicit phylogenetic networks and their biological and mathematical significance
The evolutionary relationships among organisms have traditionally been represented using
rooted phylogenetic trees. However, due to reticulate processes such as hybridization or …
rooted phylogenetic trees. However, due to reticulate processes such as hybridization or …
[HTML][HTML] Genome structure-based Juglandaceae phylogenies contradict alignment-based phylogenies and substitution rates vary with DNA repair genes
In lineages of allopolyploid origin, sets of homoeologous chromosomes may coexist that
differ in gene content and syntenic structure. Presence or absence of genes and …
differ in gene content and syntenic structure. Presence or absence of genes and …
Phylogenomic and macroevolutionary evidence for an explosive radiation of a plant genus in the Miocene
H Kong, FL Condamine, L Yang, AJ Harris… - Systematic …, 2022 - academic.oup.com
Mountain systems harbor a substantial fraction of global biodiversity and, thus, provide
excellent opportunities to study rapid diversification and to understand the historical …
excellent opportunities to study rapid diversification and to understand the historical …
[HTML][HTML] The Metasequoia genome and evolutionary relationships among redwoods
F Fu, C Song, C Wen, L Yang, Y Guo, X Yang… - Plant …, 2023 - cell.com
Abstract Redwood trees (Sequoioideae), including Metasequoia glyptostroboides (dawn
redwood), Sequoiadendron giganteum (giant sequoia), and Sequoia sempervirens (coast …
redwood), Sequoiadendron giganteum (giant sequoia), and Sequoia sempervirens (coast …
Replicated radiation of a plant clade along a cloud forest archipelago
Replicated radiations, in which sets of similar forms evolve repeatedly within different
regions, can provide powerful insights into parallel evolution and the assembly of functional …
regions, can provide powerful insights into parallel evolution and the assembly of functional …
Summary tests of introgression are highly sensitive to rate variation across lineages
LE Frankel, C Ané - Systematic Biology, 2023 - academic.oup.com
The evolutionary implications and frequency of hybridization and introgression are
increasingly being recognized across the tree of life. To detect hybridization from multi-locus …
increasingly being recognized across the tree of life. To detect hybridization from multi-locus …
Phylogenomics reveals widespread hybridization and polyploidization in Henckelia (Gesneriaceae)
LH Yang, XZ Shi, F Wen, M Kang - Annals of Botany, 2023 - academic.oup.com
Abstract Background and Aims Hybridization has long been recognized as an important
process for plant evolution and is often accompanied by polyploidization, another prominent …
process for plant evolution and is often accompanied by polyploidization, another prominent …
Recombination variation shapes phylogeny and introgression in wild diploid strawberries
Introgressive hybridization is widespread in wild plants and has important consequences.
However, frequent hybridization between species makes the estimation of the species' …
However, frequent hybridization between species makes the estimation of the species' …
Hybridization and Transgressive Evolution Generate Diversity in an Adaptive Radiation of Anolis Lizards
Interspecific hybridization may act as a major force contributing to the evolution of
biodiversity. Although generally thought to reduce or constrain divergence between 2 …
biodiversity. Although generally thought to reduce or constrain divergence between 2 …
Detectability of varied hybridization scenarios using genome-scale hybrid detection methods
Hybridization events complicate the accurate reconstruction of phylogenies, as they lead to
patterns of genetic heritability that are unexpected under traditional, bifurcating models of …
patterns of genetic heritability that are unexpected under traditional, bifurcating models of …