A foundation model for clinician-centered drug repurposing
Drug repurposing—identifying new therapeutic uses for approved drugs—is often a
serendipitous and opportunistic endeavour to expand the use of drugs for new diseases …
serendipitous and opportunistic endeavour to expand the use of drugs for new diseases …
Leveraging pleiotropy for the improved treatment of psychiatric disorders
DJ Woodward, JG Thorp, CM Middeldorp… - Molecular …, 2024 - nature.com
Over 90% of drug candidates fail in clinical trials, while it takes 10–15 years and one billion
US dollars to develop a single successful drug. Drug development is more challenging for …
US dollars to develop a single successful drug. Drug development is more challenging for …
Zero-shot drug repurposing with geometric deep learning and clinician centered design
Of the several thousand diseases that affect humans, only about 500 have treatments
approved by the US Food and Drug Administration. Even for those with approved …
approved by the US Food and Drug Administration. Even for those with approved …
Expanding drug targets for 112 chronic diseases using a machine learning-assisted genetic priority score
Identifying genetic drivers of chronic diseases is necessary for drug discovery. Here, we
develop a machine learning-assisted genetic priority score, which we call ML-GPS, that …
develop a machine learning-assisted genetic priority score, which we call ML-GPS, that …
Rare variant contribution to the heritability of coronary artery disease
Whole genome sequences (WGS) enable discovery of rare variants which may contribute to
missing heritability of coronary artery disease (CAD). To measure their contribution, we …
missing heritability of coronary artery disease (CAD). To measure their contribution, we …
[HTML][HTML] Exome sequencing of UK birth cohorts
M Koko, L Fabian, I Popov… - Wellcome Open …, 2024 - wellcomeopenresearch.org
Birth cohort studies involve repeated surveys of large numbers of individuals from birth and
throughout their lives. They collect information useful for a wide range of life course research …
throughout their lives. They collect information useful for a wide range of life course research …
Clinical Advancement Forecasting
E Czech, R Wojdyla, D Himmelstein, D Frank, N Miller… - medRxiv, 2024 - medrxiv.org
Choosing which drug targets to pursue for a given disease is one of the most impactful
decisions made in the global development of new medicines. This study examines the …
decisions made in the global development of new medicines. This study examines the …
Multi-omics characterization of type 2 diabetes associated genetic variation
Discerning the mechanisms driving type 2 diabetes (T2D) pathophysiology from genome-
wide association studies (GWAS) remains a challenge. To this end, we integrated omics …
wide association studies (GWAS) remains a challenge. To this end, we integrated omics …
Enhancing Inverse Modeling in Groundwater Systems through Machine Learning: A Comprehensive Comparative Study
J Chen, Z Dai, S Yin, M Zhang… - Hydrology and Earth …, 2024 - hess.copernicus.org
Machine learning has significantly improved inverse modeling for groundwater systems.
One promising development is the tandem neural network architecture (TNNA), which …
One promising development is the tandem neural network architecture (TNNA), which …
Specificity, length, and luck: How genes are prioritized by rare and common variant association studies
Standard genome-wide association studies (GWAS) and rare variant burden tests are
essential tools for identifying trait-relevant genes. Although these methods are conceptually …
essential tools for identifying trait-relevant genes. Although these methods are conceptually …