Overview of multiplex immunohistochemistry/immunofluorescence techniques in the era of cancer immunotherapy
WCC Tan, SN Nerurkar, HY Cai, HHM Ng… - Cancer …, 2020 - Wiley Online Library
Conventional immunohistochemistry (IHC) is a widely used diagnostic technique in tissue
pathology. However, this technique is associated with a number of limitations, including high …
pathology. However, this technique is associated with a number of limitations, including high …
Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging
Tissues and organs are composed of distinct cell types that must operate in concert to
perform physiological functions. Efforts to create high-dimensional biomarker catalogs of …
perform physiological functions. Efforts to create high-dimensional biomarker catalogs of …
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning
NF Greenwald, G Miller, E Moen, A Kong, A Kagel… - Nature …, 2022 - nature.com
A principal challenge in the analysis of tissue imaging data is cell segmentation—the task of
identifying the precise boundary of every cell in an image. To address this problem we …
identifying the precise boundary of every cell in an image. To address this problem we …
[HTML][HTML] Targeting Pin1 renders pancreatic cancer eradicable by synergizing with immunochemotherapy
Pancreatic ductal adenocarcinoma (PDAC) is characterized by notorious resistance to
current therapies attributed to inherent tumor heterogeneity and highly desmoplastic and …
current therapies attributed to inherent tumor heterogeneity and highly desmoplastic and …
[HTML][HTML] A human breast atlas integrating single-cell proteomics and transcriptomics
GK Gray, CMC Li, JM Rosenbluth, LM Selfors… - Developmental cell, 2022 - cell.com
The breast is a dynamic organ whose response to physiological and pathophysiological
conditions alters its disease susceptibility, yet the specific effects of these clinical variables …
conditions alters its disease susceptibility, yet the specific effects of these clinical variables …
Antigen dominance hierarchies shape TCF1+ progenitor CD8 T cell phenotypes in tumors
CD8 T cell responses against different tumor neoantigens occur simultaneously, yet little is
known about the interplay between responses and its impact on T cell function and tumor …
known about the interplay between responses and its impact on T cell function and tumor …
DNA-barcoded signal amplification for imaging mass cytometry enables sensitive and highly multiplexed tissue imaging
T Hosogane, R Casanova, B Bodenmiller - Nature Methods, 2023 - nature.com
Imaging mass cytometry (IMC) is a highly multiplexed, antibody-based imaging method that
captures heterogeneous spatial protein expression patterns at subcellular resolution. Here …
captures heterogeneous spatial protein expression patterns at subcellular resolution. Here …
Unsupervised discovery of tissue architecture in multiplexed imaging
J Kim, S Rustam, JM Mosquera, SH Randell… - Nature …, 2022 - nature.com
Multiplexed imaging and spatial transcriptomics enable highly resolved spatial
characterization of cellular phenotypes, but still largely depend on laborious manual …
characterization of cellular phenotypes, but still largely depend on laborious manual …
Image-based cell phenotyping with deep learning
A cell's phenotype is the culmination of several cellular processes through a complex
network of molecular interactions that ultimately result in a unique morphological signature …
network of molecular interactions that ultimately result in a unique morphological signature …
Multimodal imaging mass spectrometry: next generation molecular mapping in biology and medicine
EK Neumann, KV Djambazova… - Journal of the …, 2020 - ACS Publications
Imaging mass spectrometry has become a mature molecular mapping technology that is
used for molecular discovery in many medical and biological systems. While powerful by …
used for molecular discovery in many medical and biological systems. While powerful by …