Machine learning approaches to drug response prediction: challenges and recent progress

G Adam, L Rampášek, Z Safikhani, P Smirnov… - NPJ precision …, 2020 - nature.com
Cancer is a leading cause of death worldwide. Identifying the best treatment using
computational models to personalize drug response prediction holds great promise to …

Machine learning towards intelligent systems: applications, challenges, and opportunities

MN Injadat, A Moubayed, AB Nassif… - Artificial Intelligence …, 2021 - Springer
The emergence and continued reliance on the Internet and related technologies has
resulted in the generation of large amounts of data that can be made available for analyses …

Deep learning identifies synergistic drug combinations for treating COVID-19

W Jin, JM Stokes, RT Eastman, Z Itkin… - Proceedings of the …, 2021 - National Acad Sciences
Effective treatments for COVID-19 are urgently needed. However, discovering single-agent
therapies with activity against severe acute respiratory syndrome coronavirus 2 (SARS-CoV …

[HTML][HTML] A deep learning framework for predicting response to therapy in cancer

T Sakellaropoulos, K Vougas, S Narang, F Koinis… - Cell reports, 2019 - cell.com
A major challenge in cancer treatment is predicting clinical response to anti-cancer drugs on
a personalized basis. Using a pharmacogenomics database of 1,001 cancer cell lines, we …

Deep learning for drug response prediction in cancer

D Baptista, PG Ferreira, M Rocha - Briefings in bioinformatics, 2021 - academic.oup.com
Predicting the sensitivity of tumors to specific anti-cancer treatments is a challenge of
paramount importance for precision medicine. Machine learning (ML) algorithms can be …

Deep learning methods for drug response prediction in cancer: predominant and emerging trends

A Partin, TS Brettin, Y Zhu, O Narykov, A Clyde… - Frontiers in …, 2023 - frontiersin.org
Cancer claims millions of lives yearly worldwide. While many therapies have been made
available in recent years, by in large cancer remains unsolved. Exploiting computational …

[HTML][HTML] Machine learning in the prediction of cancer therapy

R Rafique, SMR Islam, JU Kazi - Computational and Structural …, 2021 - Elsevier
Resistance to therapy remains a major cause of cancer treatment failures, resulting in many
cancer-related deaths. Resistance can occur at any time during the treatment, even at the …

Artificial intelligence in early drug discovery enabling precision medicine

F Boniolo, E Dorigatti, AJ Ohnmacht… - Expert Opinion on …, 2021 - Taylor & Francis
Introduction: Precision medicine is the concept of treating diseases based on environmental
factors, lifestyles, and molecular profiles of patients. This approach has been found to …

Predicting synergism of cancer drug combinations using NCI-ALMANAC data

P Sidorov, S Naulaerts, J Ariey-Bonnet… - Frontiers in …, 2019 - frontiersin.org
Drug combinations are of great interest for cancer treatment. Unfortunately, the discovery of
synergistic combinations by purely experimental means is only feasible on small sets of …

MatchMaker: a deep learning framework for drug synergy prediction

HI Kuru, O Tastan, AE Cicek - IEEE/ACM transactions on …, 2021 - ieeexplore.ieee.org
Drug combination therapies have been a viable strategy for the treatment of complex
diseases such as cancer due to increased efficacy and reduced side effects. However …