The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota
JC Lagier, P Hugon, S Khelaifia… - Clinical microbiology …, 2015 - Am Soc Microbiol
Bacterial culture was the first method used to describe the human microbiota, but this
method is considered outdated by many researchers. Metagenomics studies have since …
method is considered outdated by many researchers. Metagenomics studies have since …
Microbial sulfur metabolism and environmental implications
Sulfur as a macroelement plays an important role in biochemistry in both natural
environments and engineering biosystems, which can be further linked to other important …
environments and engineering biosystems, which can be further linked to other important …
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
The application of phylogenetic taxonomic procedures led to improvements in the
classification of bacteria assigned to the phylum Actinobacteria but even so there remains a …
classification of bacteria assigned to the phylum Actinobacteria but even so there remains a …
Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea
The polyphasic approach used today in the taxonomy and systematics of the Bacteria and
Archaea includes the use of phenotypic, chemotaxonomic and genotypic data. The use of …
Archaea includes the use of phenotypic, chemotaxonomic and genotypic data. The use of …
Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling
Background Sediments are massive reservoirs of carbon compounds and host a large
fraction of microbial life. Microorganisms within terrestrial aquifer sediments control buried …
fraction of microbial life. Microorganisms within terrestrial aquifer sediments control buried …
Microbial Cleavage of C–F Bonds in Two C6 Per- and Polyfluorinated Compounds via Reductive Defluorination
The C–F bond is one of the strongest single bonds in nature. Although microbial reductive
dehalogenation is well known for the other organohalides, no microbial reductive …
dehalogenation is well known for the other organohalides, no microbial reductive …
Metagenomic analysis further extends the role of Chloroflexi in fundamental biogeochemical cycles
Chloroflexi members are ubiquitous and have been extensively studied; however, the
evolution and metabolic pathways of Chloroflexi members have long been debated. In the …
evolution and metabolic pathways of Chloroflexi members have long been debated. In the …
A polyphasic strategy incorporating genomic data for the taxonomic description of novel bacterial species
Currently, bacterial taxonomy relies on a polyphasic approach based on the combination of
phenotypic and genotypic characteristics. However, the current situation is paradoxical in …
phenotypic and genotypic characteristics. However, the current situation is paradoxical in …
[HTML][HTML] A review of prokaryotic populations and processes in sub-seafloor sediments, including biosphere: geosphere interactions
A general review of the sub-seafloor biosphere is presented. This includes an update and
assessment of prokaryotic cell distributions within marine sediments, current deepest 1922 …
assessment of prokaryotic cell distributions within marine sediments, current deepest 1922 …
Improve niche colonization and microbial interactions for organohalide-respiring-bacteria-mediated remediation of chloroethene-contaminated sites
R Wu, R Shen, Z Liang, S Zheng, Y Yang… - Environmental …, 2023 - ACS Publications
Organohalide-respiring bacteria (OHRB)-mediated reductive dehalogenation is promising in
in situ bioremediation of chloroethene-contaminated sites. The bioremediation efficiency of …
in situ bioremediation of chloroethene-contaminated sites. The bioremediation efficiency of …