LNCcation: lncRNA localization and function

MC Bridges, AC Daulagala, A Kourtidis - Journal of Cell Biology, 2021 - rupress.org
Subcellular localization of RNAs has gained attention in recent years as a prevalent
phenomenon that influences numerous cellular processes. This is also evident for the large …

[HTML][HTML] Lost in transportation: nucleocytoplasmic transport defects in ALS and other neurodegenerative diseases

HJ Kim, JP Taylor - Neuron, 2017 - cell.com
Amyotrophic lateral sclerosis (ALS) is a progressive, fatal neurodegenerative disease
characterized by degeneration of upper and lower motor neurons in the brain and spinal …

[HTML][HTML] Atlas of subcellular RNA localization revealed by APEX-Seq

FM Fazal, S Han, KR Parker, P Kaewsapsak, J Xu… - Cell, 2019 - cell.com
We introduce APEX-seq, a method for RNA sequencing based on direct proximity labeling of
RNA using the peroxidase enzyme APEX2. APEX-seq in nine distinct subcellular locales …

Experimental realization of diffusion with stochastic resetting

O Tal-Friedman, A Pal, A Sekhon… - The journal of …, 2020 - ACS Publications
Stochastic resetting is prevalent in natural and man-made systems, giving rise to a long
series of nonequilibrium phenomena. Diffusion with stochastic resetting serves as a …

Control of mammalian gene expression by selective mRNA export

VO Wickramasinghe, RA Laskey - Nature reviews Molecular cell biology, 2015 - nature.com
Nuclear export of mRNAs is a crucial step in the regulation of gene expression, linking
transcription in the nucleus to translation in the cytoplasm. Although important components …

Distinct roles of nuclear basket proteins in directing the passage of mRNA through the nuclear pore

Y Li, V Aksenova, M Tingey, J Yu… - Proceedings of the …, 2021 - National Acad Sciences
The in vivo characterization of the exact copy number and the specific function of each
composite protein within the nuclear pore complex (NPC) remains both desirable and …

Super-resolved 3D tracking of cargo transport through nuclear pore complexes

R Chowdhury, A Sau, SM Musser - Nature cell biology, 2022 - nature.com
Nuclear pore complexes (NPCs) embedded within the nuclear envelope mediate rapid,
selective and bidirectional traffic between the cytoplasm and the nucleoplasm. Deciphering …

[HTML][HTML] Nuclear export of messenger RNA

J Katahira - Genes, 2015 - mdpi.com
Transport of messenger RNA (mRNA) from the nucleus to the cytoplasm is an essential step
of eukaryotic gene expression. In the cell nucleus, a precursor mRNA undergoes a series of …

[HTML][HTML] The great escape: mRNA export through the nuclear pore complex

P De Magistris - International journal of molecular sciences, 2021 - mdpi.com
Nuclear export of messenger RNA (mRNA) through the nuclear pore complex (NPC) is an
indispensable step to ensure protein translation in the cytoplasm of eukaryotic cells. mRNA …

First‐passage processes in cellular biology

S Iyer‐Biswas, A Zilman - Advances in chemical physics, 2016 - Wiley Online Library
Many aspects of the behaviors of physical, chemical, and biological systems can be
understood simply in terms of the dynamics of the averaged state variables and their …