Deformable medical image registration: A survey

A Sotiras, C Davatzikos… - IEEE transactions on …, 2013 - ieeexplore.ieee.org
Deformable image registration is a fundamental task in medical image processing. Among
its most important applications, one may cite: 1) multi-modality fusion, where information …

A review of atlas-based segmentation for magnetic resonance brain images

M Cabezas, A Oliver, X Lladó, J Freixenet… - Computer methods and …, 2011 - Elsevier
Normal and abnormal brains can be segmented by registering the target image with an
atlas. Here, an atlas is defined as the combination of an intensity image (template) and its …

Evolution of human brain atlases in terms of content, applications, functionality, and availability

WL Nowinski - Neuroinformatics, 2021 - Springer
Human brain atlases have been evolving tremendously, propelled recently by brain big
projects, and driven by sophisticated imaging techniques, advanced brain mapping …

Deformable registration of glioma images using EM algorithm and diffusion reaction modeling

A Gooya, G Biros, C Davatzikos - IEEE transactions on medical …, 2010 - ieeexplore.ieee.org
This paper investigates the problem of atlas registration of brain images with gliomas.
Multiparametric imaging modalities (T1, T1-CE, T2, and FLAIR) are first utilized for …

ORBIT: A multiresolution framework for deformable registration of brain tumor images

EI Zacharaki, D Shen, SK Lee… - IEEE transactions on …, 2008 - ieeexplore.ieee.org
A deformable registration method is proposed for registering a normal brain atlas with
images of brain tumor patients. The registration is facilitated by first simulating the tumor …

Non-diffeomorphic registration of brain tumor images by simulating tissue loss and tumor growth

EI Zacharaki, CS Hogea, D Shen, G Biros… - Neuroimage, 2009 - Elsevier
Although a variety of diffeomorphic deformable registration methods exist in the literature,
application of these methods in the presence of space-occupying lesions is not …

Towards an architecture of a multi-purpose, user-extendable reference human brain atlas

WL Nowinski - Neuroinformatics, 2022 - Springer
Human brain atlas development is predominantly research-oriented and the use of atlases
in clinical practice is limited. Here I introduce a new definition of a reference human brain …

Atlas-based segmentation

M Bach Cuadra, V Duay, JP Thiran - Handbook of Biomedical Imaging …, 2015 - Springer
Image segmentation is a main task in many medical applications such as surgical or
radiation therapy planning, automatic labelling of anatomical structures or morphological …

Dense deformation field estimation for atlas-based segmentation of pathological MR brain images

MB Cuadra, M De Craene, V Duay, B Macq… - Computer methods and …, 2006 - Elsevier
Atlas registration is a recognized paradigm for the automatic segmentation of normal MR
brain images. Unfortunately, atlas-based segmentation has been of limited use in presence …

New techniques for cartilage magnetic resonance imaging relaxation time analysis: Texture analysis of flattened cartilage and localized intra‐and inter‐subject …

J Carballido‐Gamio, TM Link… - Magnetic Resonance in …, 2008 - Wiley Online Library
MR relaxation time measurements of knee cartilage have shown potential to characterize
knee osteoarthritis (OA). In this work, techniques that allow localized intra‐and inter‐subject …