A decade of toxicogenomic research and its contribution to toxicological science
Toxicogenomics enjoyed considerable attention as a ground-breaking addition to
conventional toxicology assays at its inception. However, the pace at which toxicogenomics …
conventional toxicology assays at its inception. However, the pace at which toxicogenomics …
Invited review: Toxicoproteomics: Proteomics applied to toxicology and pathology
BA Wetmore, BA Merrick - Toxicologic pathology, 2004 - journals.sagepub.com
Global measurement of proteins and their many attributes in tissues and biofluids defines
the field of proteomics. Toxicoproteomics, as part of the larger field of toxicogenomics, seeks …
the field of proteomics. Toxicoproteomics, as part of the larger field of toxicogenomics, seeks …
The MicroArray Quality Control (MAQC) project shows inter-and intraplatform reproducibility of gene expression measurements.
L Shi, LH Reid, WD Jones, R Shippy… - Nature …, 2006 - europepmc.org
Over the last decade, the introduction of microarray technology has had a profound impact
on gene expression research. The publication of studies with dissimilar or altogether …
on gene expression research. The publication of studies with dissimilar or altogether …
The MicroArray Quality Control (MAQC) project shows inter-and intraplatform reproducibility of gene expression measurements
Nature biotechnology, 2006 - nature.com
Over the last decade, the introduction of microarray technology has had a profound impact
on gene expression research. The publication of studies with dissimilar or altogether …
on gene expression research. The publication of studies with dissimilar or altogether …
Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical–gene–disease networks
AP Davis, CG Murphy… - Nucleic acids …, 2009 - academic.oup.com
Abstract The Comparative Toxicogenomics Database (CTD) is a curated database that
promotes understanding about the effects of environmental chemicals on human health …
promotes understanding about the effects of environmental chemicals on human health …
Rat toxicogenomic study reveals analytical consistency across microarray platforms
To validate and extend the findings of the MicroArray Quality Control (MAQC) project, a
biologically relevant toxicogenomics data set was generated using 36 RNA samples from …
biologically relevant toxicogenomics data set was generated using 36 RNA samples from …
Examination of Triacylglycerol Biosynthetic Pathways via De Novo Transcriptomic and Proteomic Analyses in an Unsequenced Microalga
Biofuels derived from algal lipids represent an opportunity to dramatically impact the global
energy demand for transportation fuels. Systems biology analyses of oleaginous algae …
energy demand for transportation fuels. Systems biology analyses of oleaginous algae …
Comparison of HepG2 and HepaRG by whole-genome gene expression analysis for the purpose of chemical hazard identification
DGJ Jennen, C Magkoufopoulou… - Toxicological …, 2010 - academic.oup.com
Direct comparison of the hepatoma cell lines HepG2 and HepaRG has previously been
performed by only evaluating a limited set of genes or proteins. In this study, we examined …
performed by only evaluating a limited set of genes or proteins. In this study, we examined …
Trade-off predictivity and explainability for machine-learning powered predictive toxicology: An in-depth investigation with Tox21 data sets
Selecting a model in predictive toxicology often involves a trade-off between prediction
performance and explainability: should we sacrifice the model performance to gain …
performance and explainability: should we sacrifice the model performance to gain …
Techniques: application of systems biology to absorption, distribution, metabolism, excretion and toxicity
S Ekins, Y Nikolsky, T Nikolskaya - Trends in pharmacological sciences, 2005 - cell.com
It is widely recognized that either predicting or determining the absorption, distribution,
metabolism, excretion and toxicity (ADME/Tox) properties of molecules helps to prevent the …
metabolism, excretion and toxicity (ADME/Tox) properties of molecules helps to prevent the …