Monocyte differentiation and heterogeneity: inter-subset and interindividual differences

H Williams, C Mack, R Baraz, R Marimuthu… - International Journal of …, 2023 - mdpi.com
The three subsets of human monocytes, classical, intermediate, and nonclassical, show
phenotypic heterogeneity, particularly in their expression of CD14 and CD16. This has …

Epigenetic perspectives associated with COVID-19 infection and related cytokine storm: an updated review

A Dey, K Vaishak, D Deka, AK Radhakrishnan, S Paul… - Infection, 2023 - Springer
Purpose The COVID-19 pandemic caused by the novel Severe Acute Respiratory Syndrome
Corona Virus 2 (SARS-CoV-2) has put the world in a medical crisis for the past three years; …

Epigenetic regulation of innate immune dynamics during inflammation

BA Caldwell, L Li - Journal of leukocyte biology, 2024 - academic.oup.com
Innate immune cells play essential roles in modulating both immune defense and
inflammation by expressing a diverse array of cytokines and inflammatory mediators …

COVID-19 and trained immunity: the inflammatory burden of long covid

J Gu, Q Liu, J Zhang, S Xu - Frontiers in Immunology, 2023 - frontiersin.org
Severe COVID-19 elicits excessive inflammation mediated by innate immune cells like
monocytes. Recent evidence reveals extensive epigenetic changes in monocytes during …

Decoding the multiple functions of ZBP1 in the mechanism of sepsis-induced acute lung injury

T Gong, Y Fu, Q Wang, PA Loughran, Y Li… - Communications …, 2024 - nature.com
Sepsis-induced acute lung injury (ALI), characterized by severe hypoxemia and pulmonary
leakage, remains a leading cause of mortality in intensive care units. The exacerbation of …

Deep generative models in single-cell omics

I Rivero-Garcia, M Torres, F Sánchez-Cabo - Computers in Biology and …, 2024 - Elsevier
Abstract Deep Generative Models (DGMs) are becoming instrumental for inferring
probability distributions inherent to complex processes, such as most questions in …

SARS-CoV-2 infection perturbs enhancer mediated transcriptional regulation of key pathways

Y Yedidya, D Davis, Y Drier - PLoS Computational Biology, 2023 - journals.plos.org
Despite extensive studies on the effects of SARS-CoV-2 infection, there is still a lack of
understanding of the downstream epigenetic and regulatory alterations in infected cells. In …

Epigenetic modulation of myeloid cell functions in HIV and SARS-CoV-2 infection

C Krause, E Bergmann, SV Schmidt - Molecular Biology Reports, 2024 - Springer
Myeloid cells play a vital role in innate immune responses as they recognize and
phagocytose pathogens like viruses, present antigens, produce cytokines, recruit other …

[HTML][HTML] Longitudinal home self-collection of capillary blood using homeRNA correlates interferon and innate viral defense pathways with SARS-CoV-2 viral clearance

FY Lim, SY Kim, KN Kulkarni, RL Blazevic, LE Kimball… - medRxiv, 2023 - ncbi.nlm.nih.gov
Blood transcriptional profiling is a powerful tool to evaluate immune responses to infection;
however, blood collection via traditional phlebotomy remains a barrier to precise …

Immune Homeostasis: A Novel Example of Teamwork

V Kumar, JH Stewart IV - Immune Homeostasis: Methods and Protocols, 2024 - Springer
All living organisms must maintain homeostasis to survive, reproduce, and pass their traits
on to the next generation. If homeostasis is not maintained, it can result in various diseases …