Escherichia coli Residency in the Gut of Healthy Human Adults

JNV Martinson, ST Walk - EcoSal plus, 2020 - Am Soc Microbiol
Escherichia coli is one of the most well-studied bacterial species, but several significant
knowledge gaps remain regarding its ecology and natural history. Specifically, the most …

Pulsed-field gel electrophoresis (PFGE): A review of the “gold standard” for bacteria typing and current alternatives

H Neoh, XE Tan, HF Sapri, TL Tan - Infection, Genetics and Evolution, 2019 - Elsevier
Pulsed-field gel electrophoresis (PFGE) is considered the “gold standard” for bacteria typing.
The method involves enzyme restriction of bacteria DNA, separation of the restricted DNA …

Distribution of repetitive DNA sequences in eubacteria and application to finerpriting of bacterial enomes

J Versalovic, T Koeuth, R Lupski - Nucleic acids research, 1991 - academic.oup.com
Dispersed repetitive DNA sequences have been described recently in eubacteria. To assess
the distribution and evolutionary conservation of two distinct prokaryotic repetitive elements …

Identification of genes that are associated with DNA repeats in prokaryotes

R Jansen, JDA Embden, W Gaastra… - Molecular …, 2002 - Wiley Online Library
Using in silico analysis we studied a novel family of repetitive DNA sequences that is
present among both domains of the prokaryotes (Archaea and Bacteria), but absent from …

Avian colibacillosis and salmonellosis: a closer look at epidemiology, pathogenesis, diagnosis, control and public health concerns

SM Lutful Kabir - International journal of environmental research and …, 2010 - mdpi.com
Avian colibacillosis and salmonellosis are considered to be the major bacterial diseases in
the poultry industry world-wide. Colibacillosis and salmonellosis are the most common avian …

American Foulbrood in honeybees and its causative agent, Paenibacillus larvae

E Genersch - Journal of invertebrate pathology, 2010 - Elsevier
After more than a century of American Foulbrood (AFB) research, this fatal brood infection is
still among the most deleterious bee diseases. Its etiological agent is the Gram-positive …

Principles and applications of methods for DNA-based typing of microbial organisms

DM Olive, P Bean - Journal of clinical microbiology, 1999 - Am Soc Microbiol
Outbreaks of infectious disease often result from exposure to a common source of the
etiologic agent. Generally, the etiologic agent causing an outbreak of infection is derived …

Specific genomic fingerprints of phytopathogenic Xanthomonas and Pseudomonas pathovars and strains generated with repetitive sequences and PCR

FJ Louws, DW Fulbright, CT Stephens… - Applied and …, 1994 - Am Soc Microbiol
DNA primers corresponding to conserved motifs in bacterial repetitive (REP, ERIC, and
BOX) elements and PCR were used to show that REP-, ERIC-, and BOX-like DNA …

Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergeneric consensus) sequences and the polymerase chain reaction to fingerprint …

FJ De Bruijn - Applied and environmental microbiology, 1992 - Am Soc Microbiol
The distribution of dispersed repetitive DNA (repetitive extragenic palindromic [REP] and
enterobacterial repetitive intergenic consensus [ERIC]) sequences in the genomes of a …

Short-sequence DNA repeats in prokaryotic genomes

A Van Belkum, S Scherer, L Van Alphen… - Microbiology and …, 1998 - Am Soc Microbiol
Short-sequence DNA repeat (SSR) loci can be identified in all eukaryotic and many
prokaryotic genomes. These loci harbor short or long stretches of repeated nucleotide …