Ancient DNA analysis

L Orlando, R Allaby, P Skoglund… - Nature reviews …, 2021 - nature.com
Although the first ancient DNA molecules were extracted more than three decades ago, the
first ancient nuclear genomes could only be characterized after high-throughput sequencing …

Population‐level inferences from environmental DNA—Current status and future perspectives

EE Sigsgaard, MR Jensen… - Evolutionary …, 2020 - Wiley Online Library
Environmental DNA (eDNA) extracted from water samples has recently shown potential as a
valuable source of population genetic information for aquatic macroorganisms. This …

A paternal environmental legacy: evidence for epigenetic inheritance through the male germ line

A Soubry, C Hoyo, RL Jirtle, SK Murphy - Bioessays, 2014 - Wiley Online Library
Literature on maternal exposures and the risk of epigenetic changes or diseases in the
offspring is growing. Paternal contributions are often not considered. However, some animal …

Genomic structure in Europeans dating back at least 36,200 years

A Seguin-Orlando, TS Korneliussen, M Sikora… - Science, 2014 - science.org
The origin of contemporary Europeans remains contentious. We obtained a genome
sequence from Kostenki 14 in European Russia dating from 38,700 to 36,200 years ago …

Reconstructing ancient genomes and epigenomes

L Orlando, MTP Gilbert, E Willerslev - Nature Reviews Genetics, 2015 - nature.com
Research involving ancient DNA (aDNA) has experienced a true technological revolution in
recent years through advances in the recovery of aDNA and, particularly, through …

Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

SST Mak, S Gopalakrishnan, C Carøe, C Geng… - …, 2017 - academic.oup.com
Ancient DNA research has been revolutionized following development of next-generation
sequencing platforms. Although a number of such platforms have been applied to ancient …

Reconstructing the DNA methylation maps of the Neandertal and the Denisovan

D Gokhman, E Lavi, K Prüfer, MF Fraga, JA Riancho… - science, 2014 - science.org
Ancient DNA sequencing has recently provided high-coverage archaic human genomes.
However, the evolution of epigenetic regulation along the human lineage remains largely …

Epigenetic estimation of age in humpback whales

AM Polanowski, J Robbins, D Chandler… - Molecular ecology …, 2014 - Wiley Online Library
Age is a fundamental aspect of animal ecology, but is difficult to determine in many species.
Humpback whales exemplify this as they have a lifespan comparable to humans, mature …

The Global Museum: natural history collections and the future of evolutionary science and public education

FT Bakker, A Antonelli, JA Clarke, JA Cook… - PeerJ, 2020 - peerj.com
Natural history museums are unique spaces for interdisciplinary research and educational
innovation. Through extensive exhibits and public programming and by hosting rich …

Population epigenetics: The extent of DNA methylation variation in wild animal populations

V Chapelle, F Silvestre - Epigenomes, 2022 - mdpi.com
Population epigenetics explores the extent of epigenetic variation and its dynamics in
natural populations encountering changing environmental conditions. In contrast to …