Examples of extreme survival: tardigrade genomics and molecular anhydrobiology

K Arakawa - Annual review of animal biosciences, 2022 - annualreviews.org
Tardigrades are ubiquitous meiofauna that are especially renowned for their exceptional
extremotolerance to various adverse environments, including pressure, temperature, and …

Space radiation biology for “Living in Space”

S Furukawa, A Nagamatsu, M Nenoi… - BioMed Research …, 2020 - Wiley Online Library
Space travel has advanced significantly over the last six decades with astronauts spending
up to 6 months at the International Space Station. Nonetheless, the living environment while …

BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database

T Brůna, KJ Hoff, A Lomsadze, M Stanke… - NAR genomics and …, 2021 - academic.oup.com
The task of eukaryotic genome annotation remains challenging. Only a few genomes could
serve as standards of annotation achieved through a tremendous investment of human …

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

C Hoencamp, O Dudchenko, AMO Elbatsh… - Science, 2021 - science.org
We investigated genome folding across the eukaryotic tree of life. We find two types of three-
dimensional (3D) genome architectures at the chromosome scale. Each type appears and …

BlobTools: Interrogation of genome assemblies

DR Laetsch, ML Blaxter - F1000Research, 2017 - research.ed.ac.uk
The goal of many genome sequencing projects is to provide a complete representation of a
target genome (or genomes) as underpinning data for further analyses. However, it can be …

Revisiting metazoan phylogeny with genomic sampling of all phyla

CE Laumer, R Fernández, S Lemer… - … of the royal …, 2019 - royalsocietypublishing.org
Proper biological interpretation of a phylogeny can sometimes hinge on the placement of
key taxa—or fail when such key taxa are not sampled. In this light, we here present the first …

[HTML][HTML] Stress-dependent cell stiffening by tardigrade tolerance proteins that reversibly form a filamentous network and gel

A Tanaka, T Nakano, K Watanabe, K Masuda… - PLoS …, 2022 - journals.plos.org
Tardigrades are able to tolerate almost complete dehydration by entering a reversible
ametabolic state called anhydrobiosis and resume their animation upon rehydration …

An integrative redescription of Hypsibius dujardini (Doyère, 1840), the nominal taxon for Hypsibioidea (Tardigrada: Eutardigrada)

P Gąsiorek, D Stec, W Morek, Ł Michalczyk - 2018 - ruj.uj.edu.pl
A laboratory strain identified as" Hypsibius dujardini" is one of the best studied tardigrade
strains: it is widely used as a model organism in a variety of research projects, ranging from …

[HTML][HTML] Mechanisms of desiccation tolerance: themes and variations in brine shrimp, roundworms, and tardigrades

JD Hibshman, JS Clegg, B Goldstein - Frontiers in Physiology, 2020 - frontiersin.org
Water is critical for the survival of most cells and organisms. Remarkably, a small number of
multicellular animals are able to survive nearly complete drying. The phenomenon of …

[HTML][HTML] The tardigrade damage suppressor protein binds to nucleosomes and protects DNA from hydroxyl radicals

C Chavez, G Cruz-Becerra, J Fei, GA Kassavetis… - Elife, 2019 - elifesciences.org
Tardigrades, also known as water bears, are animals that can survive extreme conditions.
The tardigrade Ramazzottius varieornatus contains a unique nuclear protein termed Dsup …