Targeting RNA with small molecules

JR Thomas, PJ Hergenrother - Chemical reviews, 2008 - ACS Publications
The recently discovered functions of RNA dramatically expand the cellular roles for this
macromolecule. RNA can no longer be viewed as a passive element, working simply as an …

Metal complexes as structure-selective binding agents for nucleic acids

FR Keene, JA Smith, JG Collins - Coordination Chemistry Reviews, 2009 - Elsevier
Concomitant with our increasing knowledge of the structure and biological role of nucleic
acids is the interest in the development of small molecules that can regulate DNA and RNA …

[PDF][PDF] 3D RNA and functional interactions from evolutionary couplings

C Weinreb, AJ Riesselman, JB Ingraham, T Gross… - Cell, 2016 - cell.com
Non-coding RNAs are ubiquitous, but the discovery of new RNA gene sequences far
outpaces the research on the structure and functional interactions of these RNA gene …

[PDF][PDF] Targeting RNA with small molecules

Y Tor - ChemBioChem, 2003 - academia.edu
Remarkable findings have cemented the central dogma of biology, where the transfer of
genetic information from a sequence of nucleotides in DNA to a string of amino acids in …

Downsizing human, bacterial, and viral proteins to short water-stable alpha helices that maintain biological potency

RS Harrison, NE Shepherd… - Proceedings of the …, 2010 - National Acad Sciences
Recombinant proteins are important therapeutics due to potent, highly specific, and nontoxic
actions in vivo. However, they are expensive medicines to manufacture, chemically …

Measuring RNA–ligand interactions with microscale thermophoresis

MH Moon, TA Hilimire, AM Sanders… - Biochemistry, 2018 - ACS Publications
In recent years, there has been dramatic growth in the study of RNA. RNA has gone from
being known as an intermediate in the central dogma of molecular biology to a molecule …

Comprehensive review of chemical strategies for the preparation of new aminoglycosides and their biological activities

NT Chandrika, S Garneau-Tsodikova - Chemical Society Reviews, 2018 - pubs.rsc.org
A systematic analysis of all synthetic and chemoenzymatic methodologies for the
preparation of aminoglycosides for a variety of applications (therapeutic and agricultural) …

Small molecules targeting viral RNA

G Mathez, V Cagno - International Journal of Molecular Sciences, 2023 - mdpi.com
The majority of antivirals available target viral proteins; however, RNA is emerging as a new
and promising antiviral target due to the presence of highly structured RNA in viral genomes …

RNA− Ligand Interactions: affinity and specificity of aminoglycoside dimers and acridine conjugates to the HIV-1 rev response element

NW Luedtke, Q Liu, Y Tor - Biochemistry, 2003 - ACS Publications
Semisynthetic aminoglycoside derivatives may provide a means to selectively target viral
RNA sites, including the HIV-1 Rev response element (RRE). The design, synthesis, and …

Docking to RNA via root-mean-square-deviation-driven energy minimization with flexible ligands and flexible targets

C Guilbert, TL James - Journal of chemical information and …, 2008 - ACS Publications
Structure-based drug design is now well-established for proteins as a key first step in the
lengthy process of developing new drugs. In many ways, RNA may be a better target to treat …