Life and death in the soil microbiome: how ecological processes influence biogeochemistry
Soil microorganisms shape global element cycles in life and death. Living soil
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …
Next-generation physiology approaches to study microbiome function at single cell level
The function of cells in their native habitat often cannot be reliably predicted from genomic
data or from physiology studies of isolates. Traditional experimental approaches to study the …
data or from physiology studies of isolates. Traditional experimental approaches to study the …
Microbial growth under drought is confined to distinct taxa and modified by potential future climate conditions
D Metze, J Schnecker, A Canarini… - Nature …, 2023 - nature.com
Climate change increases the frequency and intensity of drought events, affecting soil
functions including carbon sequestration and nutrient cycling, which are driven by growing …
functions including carbon sequestration and nutrient cycling, which are driven by growing …
Environmental fluctuations and their effects on microbial communities, populations and individuals
J Nguyen, J Lara-Gutiérrez… - FEMS microbiology …, 2021 - academic.oup.com
From the homeostasis of human health to the cycling of Earth's elements, microbial activities
underlie environmental, medical and industrial processes. These activities occur in chemical …
underlie environmental, medical and industrial processes. These activities occur in chemical …
Microbial functional diversity: from concepts to applications
Functional diversity is increasingly recognized by microbial ecologists as the essential link
between biodiversity patterns and ecosystem functioning, determining the trophic …
between biodiversity patterns and ecosystem functioning, determining the trophic …
Glacier ice archives nearly 15,000-year-old microbes and phages
Background Glacier ice archives information, including microbiology, that helps reveal
paleoclimate histories and predict future climate change. Though glacier-ice microbes are …
paleoclimate histories and predict future climate change. Though glacier-ice microbes are …
Active antibiotic resistome in soils unraveled by single-cell isotope probing and targeted metagenomics
Antimicrobial resistance (AMR) in soils represents a serious risk to human health through
the food chain and human–nature contact. However, the active antibiotic-resistant bacteria …
the food chain and human–nature contact. However, the active antibiotic-resistant bacteria …
Microfluidics for rapid detection of live pathogens
C Spatola Rossi, F Coulon, S Ma… - Advanced Functional …, 2023 - Wiley Online Library
Rapid, sensitive, and selective detection of live pathogens remains a key priority for quality
control and risk assessment. While conventional methods often require complicated …
control and risk assessment. While conventional methods often require complicated …
Microbiome rescue: directing resilience of environmental microbial communities
A Shade - Current Opinion in Microbiology, 2023 - Elsevier
Highlights•Microbiome management can maintain functions for systems facing climate
change.•Microbiome rescue reintroduces functional members lost to disturbance.•Rescue …
change.•Microbiome rescue reintroduces functional members lost to disturbance.•Rescue …
Consider the anoxic microsite: acknowledging and appreciating spatiotemporal redox heterogeneity in soils and sediments
Reduction–oxidation (redox) reactions underlie essentially all biogeochemical cycles. Like
most soil properties and processes, redox is spatiotemporally heterogeneous. However …
most soil properties and processes, redox is spatiotemporally heterogeneous. However …