Evolution of gene duplication in plants

N Panchy, M Lehti-Shiu, SH Shiu - Plant physiology, 2016 - academic.oup.com
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …

Gene duplication as a major force in evolution

S Magadum, U Banerjee, P Murugan, D Gangapur… - Journal of genetics, 2013 - Springer
Gene duplication is an important mechanism for acquiring new genes and creating genetic
novelty in organisms. Many new gene functions have evolved through gene duplication and …

Doubling down on genomes: polyploidy and crop plants

S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

GA Tuskan, S Difazio, S Jansson, J Bohlmann… - science, 2006 - science.org
We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of
shotgun sequence assembly with genetic mapping enabled chromosome-scale …

The role of hybridization in plant speciation

PS Soltis, DE Soltis - Annual review of plant biology, 2009 - annualreviews.org
The importance of hybridization in plant speciation and evolution has been debated for
decades, with opposing views of hybridization as either a creative evolutionary force or …

Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition

M Freeling - Annual review of plant biology, 2009 - annualreviews.org
Each mode of gene duplication (tandem, tetraploid, segmental, transpositional) retains
genes in a biased manner. A reciprocal relationship exists between plant genes retained …

[HTML][HTML] LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana

M Hundertmark, DK Hincha - BMC genomics, 2008 - Springer
Background LEA (late embryogenesis abundant) proteins have first been described about
25 years ago as accumulating late in plant seed development. They were later found in …

[HTML][HTML] A genome triplication associated with early diversification of the core eudicots

Y Jiao, J Leebens-Mack, S Ayyampalayam, JE Bowers… - Genome biology, 2012 - Springer
Background Although it is agreed that a major polyploidy event, gamma, occurred within the
eudicots, the phylogenetic placement of the event remains unclear. Results To determine …

[HTML][HTML] Architecture and evolution of a minute plant genome

E Ibarra-Laclette, E Lyons, G Hernández-Guzmán… - Nature, 2013 - nature.com
It has been argued that the evolution of plant genome size is principally unidirectional and
increasing owing to the varied action of whole-genome duplications (WGDs) and mobile …

[HTML][HTML] Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

JM Aury, O Jaillon, L Duret, B Noel, C Jubin, BM Porcel… - Nature, 2006 - nature.com
The duplication of entire genomes has long been recognized as having great potential for
evolutionary novelties, but the mechanisms underlying their resolution through gene loss …