Plant organellar RNA editing: what 30 years of research has revealed

ID Small, M Schallenberg‐Rüdinger… - The Plant …, 2020 - Wiley Online Library
The central dogma in biology defines the flow of genetic information from DNA to RNA to
protein. Accordingly, RNA molecules generally accurately follow the sequences of the genes …

GUN control in retrograde signaling: how GENOMES UNCOUPLED proteins adjust nuclear gene expression to plastid biogenesis

GZ Wu, R Bock - The Plant Cell, 2021 - academic.oup.com
Communication between cellular compartments is vital for development and environmental
adaptation. Signals emanating from organelles, so-called retrograde signals, coordinate …

When you can't trust the DNA: RNA editing changes transcript sequences

V Knoop - Cellular and Molecular Life Sciences, 2011 - Springer
RNA editing describes targeted sequence alterations in RNAs so that the transcript
sequences differ from their DNA template. Since the original discovery of RNA editing in …

Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the …

S Kahlau, R Bock - The Plant Cell, 2008 - academic.oup.com
Plastid genes are expressed at high levels in photosynthetically active chloroplasts but are
generally believed to be drastically downregulated in nongreen plastids. The genome-wide …

[PDF][PDF] Emergence of novel RNA-editing sites by changes in the binding affinity of a conserved PPR protein

FV Loiacono, D Walther, S Seeger… - Molecular Biology …, 2022 - academic.oup.com
RNA editing converts cytidines to uridines in plant organellar transcripts. Editing typically
restores codons for conserved amino acids. During evolution, specific C-to-U editing sites …

High levels of RNA editing in a vascular plant chloroplast genome: analysis of transcripts from the fern Adiantum capillus-veneris

PG Wolf, CA Rowe, M Hasebe - Gene, 2004 - Elsevier
We sequenced transcripts from all putative genes for proteins, rRNAs, and a selection of
gene-encoding tRNAs in the chloroplast genome of the fern Adiantum capillus-veneris. We …

Synthetic biology in plastids

LB Scharff, R Bock - The Plant Journal, 2014 - Wiley Online Library
Plastids (chloroplasts) harbor a small gene‐dense genome that is amenable to genetic
manipulation by transformation. During 1 billion years of evolution from the cyanobacterial …

The evolution of chloroplast RNA editing

M Tillich, P Lehwark, BR Morton… - Molecular Biology and …, 2006 - academic.oup.com
RNA editing alters the nucleotide sequence of an RNA molecule so that it deviates from the
sequence of its DNA template. Different RNA-editing systems are found in the major …

A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii

F Grewe, S Herres, P Viehöver… - Nucleic Acids …, 2011 - academic.oup.com
The analysis of the mitochondrial DNA of Isoetes engelmannii as a first representative of the
lycophytes recently revealed very small introns and indications for extremely frequent RNA …

[HTML][HTML] Arabidopsis chloroplast quantitative editotype

H Ruwe, B Castandet, C Schmitz-Linneweber… - FEBS letters, 2013 - Elsevier
Chloroplast C-to-U RNA editing is an essential post-transcriptional process. Here we
analyzed RNA editing in Arabidopsis thaliana using strand-specific deep sequencing …