HomER: a review of time-series analysis methods for near-infrared spectroscopy of the brain

TJ Huppert, SG Diamond, MA Franceschini… - Applied optics, 2009 - opg.optica.org
Near-infrared spectroscopy (NIRS) is a noninvasive neuroimaging tool for studying evoked
hemodynamic changes within the brain. By this technique, changes in the optical absorption …

[HTML][HTML] Time domain functional NIRS imaging for human brain mapping

A Torricelli, D Contini, A Pifferi, M Caffini, R Re… - Neuroimage, 2014 - Elsevier
This review is aimed at presenting the state-of-the-art of time domain (TD) functional near-
infrared spectroscopy (fNIRS). We first introduce the physical principles, the basics of …

[HTML][HTML] Optical imaging and spectroscopy for the study of the human brain: status report

H Ayaz, WB Baker, G Blaney, DA Boas… - …, 2022 - spiedigitallibrary.org
This report is the second part of a comprehensive two-part series aimed at reviewing an
extensive and diverse toolkit of novel methods to explore brain health and function. While …

The NIRS brain AnalyzIR toolbox

H Santosa, X Zhai, F Fishburn, T Huppert - Algorithms, 2018 - mdpi.com
Functional near-infrared spectroscopy (fNIRS) is a noninvasive neuroimaging technique that
uses low-levels of light (650–900 nm) to measure changes in cerebral blood volume and …

fNIRS Optodes' Location Decider (fOLD): a toolbox for probe arrangement guided by brain regions-of-interest

GA Zimeo Morais, JB Balardin, JR Sato - Scientific reports, 2018 - nature.com
The employment of functional near-infrared spectroscopy (fNIRS) as a method of brain
imaging has increased over the last few years due to its portability, low-cost and robustness …

Anatomical guidance for functional near-infrared spectroscopy: AtlasViewer tutorial

CM Aasted, MA Yücel, RJ Cooper, J Dubb… - …, 2015 - spiedigitallibrary.org
Functional near-infrared spectroscopy (fNIRS) is an optical imaging method that is used to
noninvasively measure cerebral hemoglobin concentration changes induced by brain …

Statistical analysis of fNIRS data: a comprehensive review

S Tak, JC Ye - Neuroimage, 2014 - Elsevier
Functional near-infrared spectroscopy (fNIRS) is a non-invasive method to measure brain
activities using the changes of optical absorption in the brain through the intact skull. fNIRS …

Monte Carlo simulation of photon migration in 3D turbid media accelerated by graphics processing units

Q Fang, DA Boas - Optics express, 2009 - opg.optica.org
We report a parallel Monte Carlo algorithm accelerated by graphics processing units (GPU)
for modeling time-resolved photon migration in arbitrary 3D turbid media. By taking …

GATE V6: a major enhancement of the GATE simulation platform enabling modelling of CT and radiotherapy

S Jan, D Benoit, E Becheva, T Carlier… - Physics in Medicine …, 2011 - iopscience.iop.org
Abstract GATE (Geant4 Application for Emission Tomography) is a Monte Carlo simulation
platform developed by the OpenGATE collaboration since 2001 and first publicly released in …

Review of Monte Carlo modeling of light transport in tissues

C Zhu, Q Liu - Journal of biomedical optics, 2013 - spiedigitallibrary.org
A general survey is provided on the capability of Monte Carlo (MC) modeling in tissue optics
while paying special attention to the recent progress in the development of methods for …