Translesion DNA polymerases in eukaryotes: what makes them tick?

A Vaisman, R Woodgate - Critical reviews in biochemistry and …, 2017 - Taylor & Francis
Life as we know it, simply would not exist without DNA replication. All living organisms utilize
a complex machinery to duplicate their genomes and the central role in this machinery …

Biochemistry of homologous recombination in Escherichia coli

SC Kowalczykowski, DA Dixon… - Microbiological …, 1994 - Am Soc Microbiol
Homologous recombination is a fundamental biological process. Biochemical
understanding of this process is most advanced for Escherichia coli. At least 25 gene …

Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

DL Ollis, P Brick, R Hamlin, NG Xuong, TA Steitz - Nature, 1985 - nature.com
Abstract The 3.3-Å resolution crystal structure of the large proteolytic fragment of Escherichia
coli DNA polymerase I complexed with deoxythymidine monophosphate consists of two …

Compilation, alignment, and phylogenetic relationships of DNA polymerases.

DK Braithwaite, J Ito - Nucleic acids research, 1993 - ncbi.nlm.nih.gov
SEQUENCE ALIGNMENT The multiple alignments ofthe amino acid sequences for this
update were performed in most cases by merely adding on to our original alignments (1) …

Translation is a non-uniform process: effect of tRNA availability on the rate of elongation of nascent polypeptide chains

S Varenne, J Buc, R Lloubes, C Lazdunski - Journal of molecular biology, 1984 - Elsevier
We reported elsewhere (Varenne et al., 1982) that, during synthesis of a number of colicins
in Escherichia coli, intermediate nascent chains of discrete sizes accumulated, suggesting a …

The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites

RS Fuller, BE Funnell, A Kornberg - Cell, 1984 - cell.com
Specific binding of dnaA protein to the E. coli origin of replication (ore) is essential for
initiation of chromosomal replication. Based on binding of plasmid DNA fragments, dnaA …

A conserved 3′→ 5′ exonuclease active site in prokaryotic and eukaryotic DNA polymerases

A Bernad, L Blanco, JM Lázaro, G Martin, M Salas - Cell, 1989 - cell.com
Summary The 3'~ 5'exonuclease active site of E. coli DNA polymerase I is predicted to be
conserved for both prokaryotic and eukaryotic DNA polymerases based on amino acid …

Compilation and alignment of DNA polymerase sequences.

J Ito, DK Braithwaite - Nucleic acids research, 1991 - ncbi.nlm.nih.gov
E. coli DNA polymerase IH is a multisubunit enzyme encoded by various dna genes (55); the
DNA polymerizing a-subunit encoded by thepolC (dnaE) gene (56) and the 3' …

Sequence homology between retroviral reverse transcriptase and putative polymerases of hepatitis B virus and cauliflower mosaic virus

H Toh, H Hayashida, T Miyata - Nature, 1983 - nature.com
In infected cells, the RNA genomes of RNA tumour viruses are copied into DNA by a virus-
encoded reverse transcriptase enzyme1–3. This transfer of information from RNA into DNA …

The 3′‐5′ exonuclease of DNA polymerase I of Escherichia coli: contribution of each amino acid at the active site to the reaction.

V Derbyshire, ND Grindley, CM Joyce - The EMBO Journal, 1991 - embopress.org
We have used site‐directed mutagenesis to change amino acid side chains that have been
shown crystallographically to be in close proximity to a DNA 3′ terminus bound at the 3 …