Stable isotopes and biomarkers in microbial ecology

HTS Boschker, JJ Middelburg - FEMS Microbiology Ecology, 2002 - academic.oup.com
The use of biomarkers in combination with stable isotope analysis is a new approach in
microbial ecology and a number of papers on a variety of subjects have appeared. We will …

Degradation and preservation of organic matter in marine sediments

SG Wakeham, EA Canuel - … organic matter: biomarkers, isotopes and DNA, 2006 - Springer
Organic matter that is deposited in aquatic sediments is subject to an intense diagenetic
reactor that determines how much organic carbon is eventually preserved in sediments. The …

Reviews and syntheses: to the bottom of carbon processing at the seafloor

JJ Middelburg - Biogeosciences, 2018 - bg.copernicus.org
Organic carbon processing at the seafloor is studied by biogeochemists to quantify burial
and respiration, by organic geochemists to elucidate compositional changes and by …

Macrofaunal burrows and irrigation in marine sediment: microbiological and biogeochemical interactions

E Kristensen, JE Kostka - Interactions between macro‐and …, 2005 - Wiley Online Library
Construction and maintenance of burrows by macrofauna have large implications for the
microbiology and biogeochemistry of marine sediments. Although a wealth of new …

Deposit-feeding sea cucumbers enhance mineralization and nutrient cycling in organically-enriched coastal sediments

T MacTavish, J Stenton-Dozey, K Vopel, C Savage - PloS one, 2012 - journals.plos.org
Background Bioturbators affect multiple biogeochemical interactions and have been
suggested as suitable candidates to mitigate organic matter loading in marine sediments …

Oxygen as a control on sea floor biological communities and their roles in sedimentary carbon cycling

C Woulds, GL Cowie, LA Levin… - Limnology and …, 2007 - Wiley Online Library
13C tracer experiments were conducted at sites spanning the steep oxygen, organic matter,
and biological community gradients across the Arabian Sea oxygen minimum zone, in order …

The link between microbial diversity and nitrogen cycling in marine sediments is modulated by macrofaunal bioturbation

M Yazdani Foshtomi, U Braeckman, S Derycke… - PloS one, 2015 - journals.plos.org
Objectives The marine benthic nitrogen cycle is affected by both the presence and activity of
macrofauna and the diversity of N-cycling microbes. However, integrated research …

Use of field-based stable isotope probing to identify adapted populations and track carbon flow through a phenol-degrading soil microbial community

CM DeRito, GM Pumphrey… - Applied and …, 2005 - Am Soc Microbiol
The goal of this field study was to provide insight into three distinct populations of
microorganisms involved in in situ metabolism of phenol. Our approach measured 13CO2 …

Sediment reworking by marine benthic species from the Gullmar Fjord (Western Sweden): importance of faunal biovolume

F Gilbert, S Hulth, V Grossi, JC Poggiale… - Journal of Experimental …, 2007 - Elsevier
In order to compare and quantify sediment reworking activities by different species/functional
groups of macrofauna, a laboratory experiment was carried out with species from the …

The role of depositional regime on carbon transport and preservation in Arctic Ocean sediments

LL Belicka, RW Macdonald, MB Yunker, HR Harvey - Marine Chemistry, 2004 - Elsevier
A suite of organic biomarkers was examined in six sediment cores from two shelf-basin
transects in the Chukchi and Beaufort Seas of the Arctic Ocean to compare the sources and …