The APOBEC protein family: united by structure, divergent in function

JD Salter, RP Bennett, HC Smith - Trends in biochemical sciences, 2016 - cell.com
The APOBEC (apolipoprotein B mRNA editing catalytic polypeptide-like) family of proteins
have diverse and important functions in human health and disease. These proteins have an …

HIV-1 reverse transcription

WS Hu, SH Hughes - Cold Spring Harbor …, 2012 - perspectivesinmedicine.cshlp.org
Reverse transcription and integration are the defining features of the Retroviridae; the
common name “retrovirus” derives from the fact that these viruses use a virally encoded …

An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers

K Chan, SA Roberts, LJ Klimczak, JF Sterling, N Saini… - Nature …, 2015 - nature.com
Elucidation of mutagenic processes shaping cancer genomes is a fundamental problem
whose solution promises insights into new treatment, diagnostic and prevention strategies …

Genomic analyses reveal mutational signatures and frequently altered genes in esophageal squamous cell carcinoma

L Zhang, Y Zhou, C Cheng, H Cui, L Cheng… - The American Journal of …, 2015 - cell.com
Esophageal squamous cell carcinoma (ESCC) is one of the most common cancers
worldwide and the fourth most lethal cancer in China. However, although genomic studies …

APOBEC-induced mutagenesis in cancer

TM Mertz, CD Collins, M Dennis… - Annual Review of …, 2022 - annualreviews.org
The initiation, progression, and relapse of cancers often result from mutations occurring
within somatic cells. Consequently, processes that elevate mutation rates accelerate …

Cross-species virus transmission and the emergence of new epidemic diseases

CR Parrish, EC Holmes, DM Morens… - Microbiology and …, 2008 - Am Soc Microbiol
Host range is a viral property reflecting natural hosts that are infected either as part of a
principal transmission cycle or, less commonly, as “spillover” infections into alternative hosts …

[HTML][HTML] Evasion of host immune defenses by human papillomavirus

JA Westrich, CJ Warren, D Pyeon - Virus research, 2017 - Elsevier
A majority of human papillomavirus (HPV) infections are asymptomatic and self-resolving in
the absence of medical interventions. Various innate and adaptive immune responses, as …

Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1

JF Hultquist, JA Lengyel, EW Refsland… - Journal of …, 2011 - Am Soc Microbiol
Successful intracellular pathogens must evade or neutralize the innate immune defenses of
their host cells and render the cellular environment permissive for replication. For example …

RNA editing in the forefront of epitranscriptomics and human health

T Christofi, A Zaravinos - Journal of translational medicine, 2019 - Springer
Post-transcriptional modifications have been recently expanded with the addition of RNA
editing, which is predominantly mediated by adenosine and cytidine deaminases acting on …

Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues: implications for HIV-1 restriction

EW Refsland, MD Stenglein, K Shindo… - Nucleic acids …, 2010 - academic.oup.com
The human APOBEC3 proteins are DNA cytidine deaminases that impede the replication of
many different transposons and viruses. The genes that encode APOBEC3A, APOBEC3B …