Protein cages: from fundamentals to advanced applications

TGW Edwardson, MD Levasseur, S Tetter… - Chemical …, 2022 - ACS Publications
Proteins that self-assemble into polyhedral shell-like structures are useful molecular
containers both in nature and in the laboratory. Here we review efforts to repurpose diverse …

On virus growth and form

R Zandi, B Dragnea, A Travesset, R Podgornik - Physics Reports, 2020 - Elsevier
We review approaches aimed at deciphering the physical mechanisms responsible for viral
structure and assembly. We discuss the basic principles of condensed matter physics …

emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging

BA Himes, P Zhang - Nature methods, 2018 - nature.com
Macromolecular complexes are intrinsically flexible and often challenging to purify for
structure determination by single-particle cryo-electron microscopy (cryo-EM). Such …

HIV-1 is dependent on its immature lattice to recruit IP6 for mature capsid assembly

N Renner, A Kleinpeter, DL Mallery… - Nature structural & …, 2023 - nature.com
HIV-1 Gag metamorphoses inside each virion, from an immature lattice that forms during
viral production to a mature capsid that drives infection. Here we show that the immature …

Neutral sphingomyelinase 2 is required for HIV-1 maturation

AA Waheed, Y Zhu, E Agostino… - Proceedings of the …, 2023 - National Acad Sciences
HIV-1 assembly occurs at the inner leaflet of the plasma membrane (PM) in highly ordered
membrane microdomains. The size and stability of membrane microdomains is regulated by …

Critical mechanistic features of HIV-1 viral capsid assembly

M Gupta, AJ Pak, GA Voth - Science advances, 2023 - science.org
The maturation of HIV-1 capsid protein (CA) into a cone-shaped lattice capsid is critical for
viral infectivity. CA can self-assemble into a range of capsid morphologies made of~ 175 to …

Structure and architecture of immature and mature murine leukemia virus capsids

K Qu, B Glass, M Doležal, FKM Schur… - Proceedings of the …, 2018 - National Acad Sciences
Retroviruses assemble and bud from infected cells in an immature form and require
proteolytic maturation for infectivity. The CA (capsid) domains of the Gag polyproteins …

Multiple roles of HIV-1 capsid during the virus replication cycle

M Novikova, Y Zhang, EO Freed, K Peng - Virologica Sinica, 2019 - Springer
Human immunodeficiency virus-1 capsid (HIV-1 CA) is involved in different stages of the
viral replication cycle. During virion assembly, CA drives the formation of the hexameric …

Maturation of retroviruses

O Pornillos, BK Ganser-Pornillos - Current opinion in virology, 2019 - Elsevier
During retrovirus maturation, cleavage of the precursor structural Gag polyprotein by the
viral protease induces architectural rearrangement of the virus particle from an immature into …

Why large icosahedral viruses need scaffolding proteins

S Li, P Roy, A Travesset… - Proceedings of the …, 2018 - National Acad Sciences
While small single-stranded viral shells encapsidate their genome spontaneously, many
large viruses, such as the herpes simplex virus or infectious bursal disease virus (IBDV) …