Heterogeneous multicore architectures have the potential to improve energy efficiency by
integrating power-efficient wimpy cores with high-performing brawny cores. However, it is an …

The Voronoi diagram of balls, corresponding to atoms of van der Waals radii, is particularly
well‐suited for the analysis of three‐dimensional structures of biological macromolecules …

Visual analysis is widely used to study the behavior of molecules. Of particular interest are
the analysis of molecular interactions and the investigation of binding sites. For large …

Molecular cavities, which include voids and channels, are critical for molecular function. We
present a webserver, BetaCavityWeb, which computes these cavities for a given molecular …

Voronoi diagrams are useful for spatial reasoning among particles and there are many prior
studies on their construction. However, most prior works were for the ordinary Voronoi …

A protein consists of linearly combined amino acids via peptide bonds, and an amino acid
consists of atoms. It is known that the geometric structure of a protein is the primary factor …

The proximity and topology among particles are often the most important factor for
understanding the spatial structure of particles. Reasoning the morphological structure of …

The Voronoi diagram of a point set has been extensively used in various disciplines ever
since it was first proposed. Its application realms have been even further extended to …

Quasi-triangulation is the dual structure of the Voronoi diagram of spheres, and it has been
used as a convenient and powerful geometric construct for representing the proximity …

Many applications, such as protein design, homology modeling, flexible docking, etc. require
the prediction of a protein's optimal side-chain conformations from just its amino acid …