Redox signaling by reactive electrophiles and oxidants

S Parvez, MJC Long, JR Poganik, Y Aye - Chemical reviews, 2018 - ACS Publications
The concept of cell signaling in the context of nonenzyme-assisted protein modifications by
reactive electrophilic and oxidative species, broadly known as redox signaling, is a uniquely …

Cysteine reactivity across the subcellular universe

DW Bak, TJ Bechtel, JA Falco, E Weerapana - Current opinion in chemical …, 2019 - Elsevier
Cysteine residues are concentrated at key functional sites within proteins, performing
diverse roles in metal binding, catalysis, and redox chemistry. Chemoproteomic platforms to …

[HTML][HTML] Mitochondrial complex I ROS production and redox signaling in hypoxia

CN Okoye, SA Koren, AP Wojtovich - Redox biology, 2023 - Elsevier
Mitochondria are a main source of cellular energy. Oxidative phosphorylation (OXPHOS) is
the major process of aerobic respiration. Enzyme complexes of the electron transport chain …

Monitoring Fe–S cluster occupancy across the E. coli proteome using chemoproteomics

DW Bak, E Weerapana - Nature chemical biology, 2023 - nature.com
Abstract Iron–sulfur (Fe–S) clusters are ubiquitous metallocofactors involved in redox
chemistry, radical generation and gene regulation. Common methods to monitor Fe–S …

SP3‐FAIMS chemoproteomics for high‐coverage profiling of the human cysteinome

T Yan, HS Desai, LM Boatner, SL Yen, J Cao… - …, 2021 - Wiley Online Library
Chemoproteomics has enabled the rapid and proteome‐wide discovery of functional, redox‐
sensitive, and ligandable cysteine residues. Despite widespread adoption and considerable …

Proximity-labeling chemoproteomics defines the subcellular cysteinome and inflammation-responsive mitochondrial redoxome

T Yan, AR Julio, M Villanueva, AE Jones, AB Ball… - Cell Chemical …, 2023 - cell.com
Proteinaceous cysteines function as essential sensors of cellular redox state. Consequently,
defining the cysteine redoxome is a key challenge for functional proteomic studies. While …

Redox-mediated kick-start of mitochondrial energy metabolism drives resource-efficient seed germination

T Nietzel, J Mostertz, C Ruberti, G Née… - Proceedings of the …, 2020 - National Acad Sciences
Seeds preserve a far developed plant embryo in a quiescent state. Seed metabolism relies
on stored resources and is reactivated to drive germination when the external conditions are …

Hydrogen sulfide perturbs mitochondrial bioenergetics and triggers metabolic reprogramming in colon cells

M Libiad, V Vitvitsky, T Bostelaar, DW Bak… - Journal of Biological …, 2019 - ASBMB
Unlike most other tissues, the colon epithelium is exposed to high levels of H 2 S derived
from gut microbial metabolism. H 2 S is a signaling molecule that modulates various …

Redox proteomics combined with proximity labeling enables monitoring of localized cysteine oxidation in cells

EA Kisty, JA Falco, E Weerapana - Cell chemical biology, 2023 - cell.com
Reactive oxygen species (ROS) can modulate protein function through cysteine oxidation.
Identifying protein targets of ROS can provide insight into uncharacterized ROS-regulated …

Proteome-wide detection of S-nitrosylation targets and motifs using bioorthogonal cleavable-linker-based enrichment and switch technique

R Mnatsakanyan, S Markoutsa, K Walbrunn… - Nature …, 2019 - nature.com
Cysteine modifications emerge as important players in cellular signaling and homeostasis.
Here, we present a chemical proteomics strategy for quantitative analysis of reversibly …