Where are the disease-associated eQTLs?
Most disease-associated variants, although located in putatively regulatory regions, do not
have detectable effects on gene expression. One explanation could be that we have not …
have detectable effects on gene expression. One explanation could be that we have not …
The role of sex in the genomics of human complex traits
Nearly all human complex traits and disease phenotypes exhibit some degree of sex
differences, including differences in prevalence, age of onset, severity or disease …
differences, including differences in prevalence, age of onset, severity or disease …
[HTML][HTML] A compendium of uniformly processed human gene expression and splicing quantitative trait loci
N Kerimov, JD Hayhurst, K Peikova, JR Manning… - Nature …, 2021 - nature.com
Many gene expression quantitative trait locus (eQTL) studies have published their summary
statistics, which can be used to gain insight into complex human traits by downstream …
statistics, which can be used to gain insight into complex human traits by downstream …
Phenome-wide Mendelian randomization mapping the influence of the plasma proteome on complex diseases
The human proteome is a major source of therapeutic targets. Recent genetic association
analyses of the plasma proteome enable systematic evaluation of the causal consequences …
analyses of the plasma proteome enable systematic evaluation of the causal consequences …
Cell type–specific genetic regulation of gene expression across human tissues
INTRODUCTION Efforts to map quantitative trait loci (QTLs) across human tissues by the
GTEx Consortium and others have identified expression and splicing QTLs (eQTLs and …
GTEx Consortium and others have identified expression and splicing QTLs (eQTLs and …
Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response
K Alasoo, J Rodrigues, S Mukhopadhyay, AJ Knights… - Nature …, 2018 - nature.com
Regulatory variants are often context specific, modulating gene expression in a subset of
possible cellular states. Although these genetic effects can play important roles in disease …
possible cellular states. Although these genetic effects can play important roles in disease …
A genetic link between risk for Alzheimer's disease and severe COVID-19 outcomes via the OAS1 gene
Recently, we reported oligoadenylate synthetase 1 (OAS1) contributed to the risk of
Alzheimer's disease, by its enrichment in transcriptional networks expressed by microglia …
Alzheimer's disease, by its enrichment in transcriptional networks expressed by microglia …
Landscape of stimulation-responsive chromatin across diverse human immune cells
D Calderon, MLT Nguyen, A Mezger, A Kathiria… - Nature …, 2019 - nature.com
A hallmark of the immune system is the interplay among specialized cell types transitioning
between resting and stimulated states. The gene regulatory landscape of this dynamic …
between resting and stimulated states. The gene regulatory landscape of this dynamic …
Distinctive roles of age, sex, and genetics in shaping transcriptional variation of human immune responses to microbial challenges
B Piasecka, D Duffy, A Urrutia… - Proceedings of the …, 2018 - National Acad Sciences
The contribution of host genetic and nongenetic factors to immunological differences in
humans remains largely undefined. Here, we generated bacterial-, fungal-, and viral …
humans remains largely undefined. Here, we generated bacterial-, fungal-, and viral …
Genetic associations at regulatory phenotypes improve fine-mapping of causal variants for 12 immune-mediated diseases
The resolution of causal genetic variants informs understanding of disease biology. We used
regulatory quantitative trait loci (QTLs) from the BLUEPRINT, GTEx and eQTLGen projects to …
regulatory quantitative trait loci (QTLs) from the BLUEPRINT, GTEx and eQTLGen projects to …