The structure of ecological networks across levels of organization

PR Guimaraes Jr - Annual Review of Ecology, Evolution, and …, 2020 - annualreviews.org
Interactions connect the units of ecological systems, forming networks. Individual-based
networks characterize variation in niches among individuals within populations. These …

[HTML][HTML] Complexity and stability of ecological networks: a review of the theory

P Landi, HO Minoarivelo, Å Brännström, C Hui… - Population ecology, 2018 - Springer
Our planet is changing at paces never observed before. Species extinction is happening at
faster rates than ever, greatly exceeding the five mass extinctions in the fossil record …

Environmental stress destabilizes microbial networks

DJ Hernandez, AS David, ES Menges… - The ISME …, 2021 - academic.oup.com
Environmental stress is increasing worldwide, yet we lack a clear picture of how stress
disrupts the stability of microbial communities and the ecosystem services they provide …

Analysing ecological networks of species interactions

E Delmas, M Besson, MH Brice, LA Burkle… - Biological …, 2019 - Wiley Online Library
Network approaches to ecological questions have been increasingly used, particularly in
recent decades. The abstraction of ecological systems–such as communities–through …

Network science of biological systems at different scales: A review

M Gosak, R Markovič, J Dolenšek, MS Rupnik… - Physics of life …, 2018 - Elsevier
Network science is today established as a backbone for description of structure and function
of various physical, chemical, biological, technological, and social systems. Here we review …

Ecological networks across environmental gradients

JM Tylianakis, RJ Morris - Annual Review of Ecology, Evolution …, 2017 - annualreviews.org
Ecological networks have a long history in ecology, and a recent increase in network
analyses across environmental gradients has revealed important changes in their structure …

Enemies with benefits: integrating positive and negative interactions among terrestrial carnivores

LR Prugh, KJ Sivy - Ecology Letters, 2020 - Wiley Online Library
Interactions among terrestrial carnivores involve a complex interplay of competition,
predation and facilitation via carrion provisioning, and these negative and positive pathways …

Impacts of invasive species on food webs: a review of empirical data

P David, E Thebault, O Anneville, PF Duyck… - Advances in ecological …, 2017 - Elsevier
We review empirical studies on how bioinvasions alter food webs and how a food-web
perspective may change their prediction and management. Predation is found to underlie …

Diversity of interaction types and ecological community stability

A Mougi, M Kondoh - Science, 2012 - science.org
Ecological theory predicts that a complex community formed by a number of species is
inherently unstable, guiding ecologists to identify what maintains species diversity in nature …

Ab initio protein structure assembly using continuous structure fragments and optimized knowledge‐based force field

D Xu, Y Zhang - Proteins: Structure, Function, and …, 2012 - Wiley Online Library
Ab initio protein folding is one of the major unsolved problems in computational biology
owing to the difficulties in force field design and conformational search. We developed a …