Size does matter: application-driven approaches for soil metagenomics
KS Kakirde, LC Parsley, MR Liles - Soil Biology and Biochemistry, 2010 - Elsevier
Metagenomic analyses can provide extensive information on the structure, composition, and
predicted gene functions of diverse environmental microbial assemblages. Each …
predicted gene functions of diverse environmental microbial assemblages. Each …
Biodegradation and biotransformation of explosives
Explosives now contaminate millions of hectares of land in the US alone, with global levels
of contamination difficult to fully assess. Understanding the biology behind the metabolism of …
of contamination difficult to fully assess. Understanding the biology behind the metabolism of …
Impact of long-term diesel contamination on soil microbial community structure
NB Sutton, F Maphosa, JA Morillo… - Applied and …, 2013 - Am Soc Microbiol
Microbial community composition and diversity at a diesel-contaminated railway site were
investigated by pyrosequencing of bacterial and archaeal 16S rRNA gene fragments to …
investigated by pyrosequencing of bacterial and archaeal 16S rRNA gene fragments to …
Acidobacterial community responses to agricultural management of soybean in Amazon forest soils
AA Navarrete, EE Kuramae… - FEMS microbiology …, 2013 - academic.oup.com
This study focused on the impact of land-use changes and agricultural management of
soybean in Amazon forest soils on the abundance and composition of the acidobacterial …
soybean in Amazon forest soils on the abundance and composition of the acidobacterial …
Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon
AA Navarrete, AM Venturini, KM Meyer… - Frontiers in …, 2015 - frontiersin.org
Members of the phylum Acidobacteria are among the most abundant soil bacteria on Earth,
but little is known about their response to environmental changes. We asked how the …
but little is known about their response to environmental changes. We asked how the …
Wheat and rice growth stages and fertilization regimes alter soil bacterial community structure, but not diversity
J Wang, C Xue, Y Song, L Wang, Q Huang… - Frontiers in …, 2016 - frontiersin.org
Maintaining soil fertility and the microbial communities that determine fertility is critical to
sustainable agricultural strategies, and the use of different organic fertilizer (OF) regimes …
sustainable agricultural strategies, and the use of different organic fertilizer (OF) regimes …
Novel isolates double the number of chemotrophic species and allow the first description of higher taxa in Acidobacteria subdivision 4
J Pascual, PK Wüst, A Geppert, BU Foesel… - Systematic and applied …, 2015 - Elsevier
Despite their high phylogenetic diversity and abundance in soils worldwide, Acidobacteria
represent an enigmatic bacterial phylum. Four novel Acidobacteria strains were isolated …
represent an enigmatic bacterial phylum. Four novel Acidobacteria strains were isolated …
Bacterial diversity controls transformation of wastewater-derived organic contaminants in river-simulating flumes
Hyporheic zones are the water-saturated flow-through subsurfaces of rivers which are
characterized by the simultaneous occurrence of multiple physical, biological, and chemical …
characterized by the simultaneous occurrence of multiple physical, biological, and chemical …
Microbial diversity, community composition and metabolic potential in hydrocarbon contaminated oily sludge: prospects for in situ bioremediation
R Das, SK Kazy - Environmental Science and Pollution Research, 2014 - Springer
Microbial community composition and metabolic potential have been explored in petroleum-
hydrocarbon-contaminated sludge of an oil storage facility. Culture-independent clone …
hydrocarbon-contaminated sludge of an oil storage facility. Culture-independent clone …
Early rhizosphere microbiome composition is related to the growth and Zn uptake of willows introduced to a former landfill
TH Bell, B Cloutier‐Hurteau, F Al‐Otaibi… - Environmental …, 2015 - Wiley Online Library
Although plants introduced for site restoration are pre‐selected for specific traits (eg trace
element bioaccumulation, rapid growth in poor soils), the in situ success of these plants …
element bioaccumulation, rapid growth in poor soils), the in situ success of these plants …