Tgfbr1 controls developmental plasticity between the hindlimb and external genitalia by remodeling their regulatory landscape

A Lozovska, AG Korovesi, A Dias, A Lopes… - Nature …, 2024 - nature.com
The hindlimb and external genitalia of present-day tetrapods are thought to derive from an
ancestral common primordium that evolved to generate a wide diversity of structures …

GLI transcriptional repression is inert prior to Hedgehog pathway activation

RK Lex, W Zhou, Z Ji, KN Falkenstein… - Nature …, 2022 - nature.com
The Hedgehog (HH) pathway regulates a spectrum of developmental processes through the
transcriptional mediation of GLI proteins. GLI repressors control tissue patterning by …

Hnrnpk is essential for embryonic limb bud development as a transcription activator and a collaborator of insulator protein Ctcf

Y Chen, T Zhou, Z Liao, W Gao, J Wu… - Cell Death & …, 2023 - nature.com
Proper development of the limb bud relies on the concordance of various signals, but its
molecular mechanisms have not yet been fully illustrated. Here we report that …

Enhancers are genes that express organizational RNAs

JS Mattick - Frontiers in RNA Research, 2023 - frontiersin.org
A longstanding enigma in molecular biology is the lack of scaling of protein-coding genes
with developmental complexity, referred to as the g-value paradox. On the other hand, a …

The Shh/Gli3 gene regulatory network precedes the origin of paired fins and reveals the deep homology between distal fins and digits

J Letelier, S Naranjo… - Proceedings of the …, 2021 - National Acad Sciences
One of the central problems of vertebrate evolution is understanding the relationship among
the distal portions of fins and limbs. Lacking comparable morphological markers of these …

Developmental regulation of conserved non-coding element evolution provides insights into limb loss in squamates

Z Wang, C Peng, W Wu, C Yan, Y Lv, JT Li - Science China Life Sciences, 2023 - Springer
Limb loss shows recurrent phenotypic evolution across squamate lineages. Here, based on
three de novo-assembled genomes of limbless lizards from different lineages, we showed …

Genetic cold cases: lessons from solving complex congenital limb disorders

G Andrey, D Duboule - Genes & Development, 2023 - genesdev.cshlp.org
Congenital genetic disorders affecting limb morphology in humans and other mammals are
particularly well described, due to both their rather high frequencies of occurrence and the …

A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2

M Losa, I Barozzi, M Osterwalder… - Nature …, 2023 - nature.com
A lingering question in developmental biology has centered on how transcription factors with
widespread distribution in vertebrate embryos can perform tissue-specific functions. Here …

Cell-specific alterations in Pitx1 regulatory landscape activation caused by the loss of a single enhancer

R Rouco, O Bompadre, A Rauseo, O Fazio… - Nature …, 2021 - nature.com
Developmental genes are frequently controlled by multiple enhancers sharing similar
specificities. As a result, deletions of such regulatory elements have often failed to reveal …

SMAD4 target genes are part of a transcriptional network that integrates the response to BMP and SHH signaling during early limb bud patterning

J Gamart, I Barozzi, F Laurent, R Reinhardt… - …, 2021 - journals.biologists.com
ABSTRACT SMAD4 regulates gene expression in response to BMP and TGFβ signal
transduction, and is required for diverse morphogenetic processes, but its target genes have …