Design and engineering of light-sensitive protein switches
Engineered, light-sensitive protein switches are used to interrogate a broad variety of
biological processes. These switches are typically constructed by genetically fusing naturally …
biological processes. These switches are typically constructed by genetically fusing naturally …
Protein engineering using circular permutation–structure, function, stability, and applications
D Das, SRK Ainavarapu - The FEBS Journal, 2024 - Wiley Online Library
Protein engineering is important for creating novel variants from natural proteins, enabling a
wide range of applications. Approaches such as rational design and directed evolution are …
wide range of applications. Approaches such as rational design and directed evolution are …
A general method for chemogenetic control of peptide function
Natural or engineered peptides serve important biological functions. A general approach to
achieve chemical-dependent activation of short peptides will be valuable for spatial and …
achieve chemical-dependent activation of short peptides will be valuable for spatial and …
Triggered Functional Dynamics of AsLOV2 by Time‐Resolved Electron Paramagnetic Resonance at High Magnetic Fields
We present time‐resolved Gd− Gd electron paramagnetic resonance (TiGGER) at 240 GHz
for tracking inter‐residue distances during a protein's mechanical cycle in the solution state …
for tracking inter‐residue distances during a protein's mechanical cycle in the solution state …
Protein-Based Tools for Studying Neuromodulation
W Wang - ACS Chemical Biology, 2024 - ACS Publications
Neuromodulators play crucial roles in regulating neuronal activity and affecting various
aspects of brain functions, including learning, memory, cognitive functions, emotional states …
aspects of brain functions, including learning, memory, cognitive functions, emotional states …
Circular permutation at azurin's active site slows down its folding
D Das, SRK Ainavarapu - JBIC Journal of Biological Inorganic Chemistry, 2023 - Springer
Circular permutation (CP) is a technique by which the primary sequence of a protein is
rearranged to create new termini. The connectivity of the protein is altered but the overall …
rearranged to create new termini. The connectivity of the protein is altered but the overall …
Directed evolution approaches for optogenetic tool development.
J Jang, GA Woolley - Biochemical Society Transactions, 2021 - search.ebscohost.com
Photo switchable proteins enable specific molecular events occurring in complex biological
settings to be probed in a rapid and reversible fashion. Recent progress in the development …
settings to be probed in a rapid and reversible fashion. Recent progress in the development …
Rational Design of a Circularly Permuted Flavin‐Based Fluorescent Protein
NT Anderson, JS Xie, AN Chacko, VL Liu… - …, 2024 - Wiley Online Library
Flavin‐based fluorescent proteins are oxygen‐independent reporters that hold great
promise for imaging anaerobic and hypoxic biological systems. In this study, we explored …
promise for imaging anaerobic and hypoxic biological systems. In this study, we explored …
Opto4E-BP, an optogenetic tool for inducible, reversible, and cell type-specific inhibition of translation initiation
The protein kinase mechanistic target of rapamycin complex 1 (mTORC1) is one of the
primary triggers for initiating cap-dependent translation. Amongst its functions, mTORC1 …
primary triggers for initiating cap-dependent translation. Amongst its functions, mTORC1 …
LOV2-based photoactivatable CaMKII and its application to single synapses: Local Optogenetics
Y Nagasawa, HH Ueda, H Kawabata… - Biophysics and …, 2023 - jstage.jst.go.jp
Optogenetic techniques offer a high spatiotemporal resolution to manipulate cellular activity.
For instance, Channelrhodopsin-2 with global light illumination is the most widely used to …
For instance, Channelrhodopsin-2 with global light illumination is the most widely used to …