Strategies for reducing per‐sample costs in target capture sequencing for phylogenomics and population genomics in plants

H Hale, EM Gardner, J Viruel, L Pokorny… - Applications in plant …, 2020 - Wiley Online Library
The reduced cost of high‐throughput sequencing and the development of gene sets with
wide phylogenetic applicability has led to the rise of sequence capture methods as a …

[PDF][PDF] Inactivation of a wheat protein kinase gene confers broad-spectrum resistance to rust fungi

N Wang, C Tang, X Fan, M He, P Gan, S Zhang, Z Hu… - Cell, 2022 - cell.com
Wheat crops are frequently devastated by pandemic stripe rust caused by Puccinia
striiformis f. sp. tritici (Pst). Here, we identify and characterize a wheat receptor-like …

cDNA cloning of a sorghum pathogenesis-related protein (PR-10) and differential expression of defense-related genes following inoculation with Cochliobolus …

SCC Lo, JD Hipskind… - Molecular plant-microbe …, 1999 - Am Phytopath Society
A sorghum cDNA clone was isolated by differential screening of a cDNA library prepared
from mesocotyls (cultivar DK18) inoculated with fungal pathogens. The deduced translation …

[PDF][PDF] Genome-edited triple-recessive mutation alters seed dormancy in wheat

F Abe, E Haque, H Hisano, T Tanaka, Y Kamiya… - Cell reports, 2019 - cell.com
Common wheat has three sets of sub-genomes, making mutations difficult to observe,
especially for traits controlled by recessive genes. Here, we produced hexaploid wheat lines …

The unique mutation in ace‐1 giving high insecticide resistance is easily detectable in mosquito vectors

M Weill, C Malcolm, F Chandre… - Insect molecular …, 2004 - Wiley Online Library
High insecticide resistance resulting from insensitive acetylcholinesterase (AChE) has
emerged in mosquitoes. A single mutation (G119S of the ace‐1 gene) explains this high …

Transcriptional repression of TaNOX10 by TaWRKY19 compromises ROS generation and enhances wheat susceptibility to stripe rust

N Wang, X Fan, M He, Z Hu, C Tang, S Zhang… - The Plant …, 2022 - academic.oup.com
Reactive oxygen species (ROS) are vital for plant immunity and regulation of their
production is crucial for plant health. While the mechanisms that elicit ROS production have …

Using RPB1 sequences to improve phylogenetic inference among mushrooms (Inocybe, Agaricales)

PB Matheny, YJ Liu, JF Ammirati… - American Journal of …, 2002 - Wiley Online Library
An investigation of mushroom phylogeny using the largest subunit of RNA polymerase II
gene sequences (RPB1) was conducted in comparison with nuclear ribosomal large subunit …

Specific adaptation of Ustilaginoidea virens in occupying host florets revealed by comparative and functional genomics

Y Zhang, K Zhang, A Fang, Y Han, J Yang… - Nature …, 2014 - nature.com
Abstract Ustilaginoidea virens (Cooke) Takah is an ascomycetous fungus that causes rice
false smut, a devastating emerging disease worldwide. Here we report a 39.4 Mb draft …

DNA extraction and PCR amplification method suitable for fresh, herbarium-stored, lichenized, and other fungi

OF Cubero, ANA Crespo, J Fatehi… - Plant Systematics and …, 1999 - Springer
This paper presents a DNA extraction method suitable for fresh, herbarium-stored,
lichenized and other fungal specimens. The method is fast and reliable, comparatively …

Soil fungi: diversity and detection

P Bridge, B Spooner - Plant and soil, 2001 - Springer
The great majority of the 80 000+ fungal species so far named and described are likely to
occur in the soil environment at some stage in their life-cycle. Fungi therefore have many …