The multiple mechanisms that regulate p53 activity and cell fate

A Hafner, ML Bulyk, A Jambhekar… - Nature reviews Molecular …, 2019 - nature.com
The tumour suppressor p53 has a central role in the response to cellular stress. Activated
p53 transcriptionally regulates hundreds of genes that are involved in multiple biological …

Census and evaluation of p53 target genes

M Fischer - Oncogene, 2017 - nature.com
The tumor suppressor p53 functions primarily as a transcription factor. Mutation of the TP53
gene alters its response pathway, and is central to the development of many cancers. The …

[HTML][HTML] Proteogenomic characterization of endometrial carcinoma

Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang… - Cell, 2020 - cell.com
We undertook a comprehensive proteogenomic characterization of 95 prospectively
collected endometrial carcinomas, comprising 83 endometrioid and 12 serous tumors. This …

Unravelling mechanisms of p53-mediated tumour suppression

KT Bieging, SS Mello, LD Attardi - Nature Reviews Cancer, 2014 - nature.com
Abstract p53 is a crucial tumour suppressor that responds to diverse stress signals by
orchestrating specific cellular responses, including transient cell cycle arrest, cellular …

iRegulon: from a gene list to a gene regulatory network using large motif and track collections

R Janky, A Verfaillie, H Imrichová… - PLoS computational …, 2014 - journals.plos.org
Identifying master regulators of biological processes and mapping their downstream gene
networks are key challenges in systems biology. We developed a computational method …

Sp1 transcription factor: A long-standing target in cancer chemotherapy

C Vizcaíno, S Mansilla, J Portugal - Pharmacology & therapeutics, 2015 - Elsevier
Abstract Sp1 (specificity protein 1) is a well-known member of a family of transcription factors
that also includes Sp2, Sp3 and Sp4, which are implicated in an ample variety of essential …

The p53-p21-DREAM-CDE/CHR pathway regulates G2/M cell cycle genes

M Fischer, M Quaas, L Steiner… - Nucleic acids …, 2016 - academic.oup.com
The tumor suppressor p53 functions predominantly as a transcription factor by activating and
downregulating gene expression, leading to cell cycle arrest or apoptosis. p53 was shown to …

Global genomic profiling reveals an extensive p53-regulated autophagy program contributing to key p53 responses

DK Broz, SS Mello, KT Bieging, D Jiang… - Genes & …, 2013 - genesdev.cshlp.org
The mechanisms by which the p53 tumor suppressor acts remain incompletely understood.
To gain new insights into p53 biology, we used high-throughput sequencing to analyze …

eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses

L Micallef, P Rodgers - PloS one, 2014 - journals.plos.org
Venn diagrams with three curves are used extensively in various medical and scientific
disciplines to visualize relationships between data sets and facilitate data analysis. The area …

Epigenomics of human CD8 T cell differentiation and aging

DM Moskowitz, DW Zhang, B Hu, S Le Saux… - Science …, 2017 - science.org
The efficacy of the adaptive immune response declines markedly with age, but the cell-
intrinsic mechanisms driving immune aging in humans remain poorly understood. Immune …